PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT37523.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | GRF | ||||||||
Protein Properties | Length: 487aa MW: 54234 Da PI: 9.7931 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 78.9 | 4.9e-25 | 264 | 308 | 1 | 45 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCsr+v++g+k+CErH+hrgr+rsrk++e+ PHT37523.1 264 DPEPGRCRRTDGKKWRCSRDVVSGHKYCERHVHRGRNRSRKPVET 308 79****************************************996 PP | |||||||
2 | QLQ | 48.2 | 3.3e-17 | 198 | 234 | 1 | 37 |
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 s+F+ aQ+q+L+ Q+l+yK+++a++PvP eLl i+k PHT37523.1 198 SYFSLAQWQELELQALVYKHMLAGAPVPNELLHLIKK 234 79******************************98875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 487 aa Download sequence |
MKVAEMRMLR WMCGLTRGDR ARNETIREKI GVENKMREVR LRWFGHVMRR GMNAPVRRCE 60 KLALDGFRRG RGRLKNYWGQ DPMKLVAVTP PPPNPIIDFN LKQWRNEQKN ESSSEEVKNT 120 AKLPRLVLDL DSSYFSSCYP HSSSATTGFS VSCSDNTDTS VLPLFVSEPP TNNKLSAFPL 180 SPDSTVLTAT KLPRMESSYF SLAQWQELEL QALVYKHMLA GAPVPNELLH LIKKSLINSS 240 PYYNLPQQYH HYQQACYWGR TNMDPEPGRC RRTDGKKWRC SRDVVSGHKY CERHVHRGRN 300 RSRKPVETTT TAAPRVGNAA ASNRGSGEAL RVNPAMVNQG GVAPQFTLSG HAASTDLLHL 360 NQRPMEGQND GGSNGQILLH FFDDWPRQQL EENDNAGSMA SATSLSISMP GNPSSDVSLK 420 LSTGDRHNSD VRFSNVERST WGTNHVASMG GGPLAEALRS SMSNSSPTSV LHHLTHGNTS 480 DASCVST |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G52910.1 | 9e-68 | GRF family protein |