PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT37270.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 355aa    MW: 39064.7 Da    PI: 6.013
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT37270.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.21.6e-09198245455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++iN ++  L+el+P +    +k    a++L + +++++sLq
  PHT37270.1 198 SHSLAERARREKINARMKLLQELVPGC----NKISGTAMVLDEIINHVQSLQ 245
                 8*************************9....89999***************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    
MGEIPTDFNS FDEEILPITS EPGSSFTALL GLPANQAVEL LVQTPETDNK IESDKINVPY  60
YHYPPPALGP TPTPIPIFPS DIALIDRASK FSVFATTAGG GGNGVGNSPE SNSTLSNSGS  120
KALLVKQEPM DSEFNQNSSP ASSVPMGDRK SMKRKEREKK VKETTKKGKT SANDTSEEGA  180
EKLPYVHVRA RRGQATDSHS LAERARREKI NARMKLLQEL VPGCNKISGT AMVLDEIINH  240
VQSLQRQVEF LSMRLAAVNP RVDFNLDNLF AAERSGSHVE SNLPDMIVPP IWTEGQTSGN  300
RNHYQHLWHF EGFHQPVWGR LEDNSSFVTP ENSLLTYDSS ANSASLHPNQ LKMEL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57800.25e-77bHLH family protein