PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT36963.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB
Protein Properties Length: 320aa    MW: 37073.6 Da    PI: 7.7063
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT36963.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.42.8e-174794148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd +lv +++++G+g+W++++   g+ R+ k+c++rw +yl
       PHT36963.1 47 KGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLMRCSKSCRLRWTNYL 94
                     79********************************************97 PP
2Myb_DNA-binding45.81.4e-14100145148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T+ E+  ++++ ++lG++ W++Ia++++  Rt++++k++w+++l
       PHT36963.1 100 RGNFTPHEEGMIIHLQALLGNK-WAAIASYLP-QRTDNDIKNYWNTHL 145
                      89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MPLHFHFNFL YIHQKHFTQK QLQQQHPTHL KQTMGRPPCC DKIGIKKGPW TPEEDIILVS  60
YIQEHGPGNW RSVPTNTGLM RCSKSCRLRW TNYLRPGIKR GNFTPHEEGM IIHLQALLGN  120
KWAAIASYLP QRTDNDIKNY WNTHLKKKLK KLQTELDSHN LAPLLPNNNN NNINYDNHHQ  180
YSWQLSVNNN DKQGISSNSS SSSLYASSTE NISRLLEGWM RSSPNNPSRR NNIYHDHDDE  240
MLHVAQKNDQ DQEIVKSTCE ENENSWIIPK EKSSNCESNG VVVVDHGKTS PPPFTYLEKW  300
LLEENGGQVE ELMELPMIFT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08810.13e-88MYB family protein