PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT36781.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

WRKY

Protein Properties

Length: 462aa MW: 51255.5 Da PI: 9.9871

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT36781.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101.6	4.6e-32	192	248	3	60
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 DgynWrKYGqK+vkgse+prsYY+Ct+ +Cpvkkkvers d++++ei+Y+geHnh+k PHT36781.1 192 DGYNWRKYGQKQVKGSEYPRSYYKCTHLKCPVKKKVERSY-DGQITEIVYRGEHNHPK 248 9*************************************.*************85 PP
2	WRKY	93.9	1.1e-29	381	437	2	58
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 +Dg++WrKYGqK+vkgs +prsYYrCts++C+v+k ve +++dp+++++tYeg+H h PHT36781.1 381 EDGFRWRKYGQKVVKGSSYPRSYYRCTSPKCSVRKFVEGTTDDPRAFITTYEGKHYH 437 7******************************************************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 462 aa Download sequence
MEVNEAAKIP IARPVASRPR CPVYKSFSEL LTGAVDISST NVHSEMAITA IRPKTIRLKP 60 ATNHALVGEP SSQVGVSEAP VGFGSDNILQ SVKKPKVLYK PIAKLAPRKT IPLLENKGSS 120 VSDQQRVIDE AHIQSANEVK QQHDPTTESK QSLSAKSGQD KKKVRSTIVS GSTEEVAQSL 180 INTSNVDRPS YDGYNWRKYG QKQVKGSEYP RSYYKCTHLK CPVKKKVERS YDGQITEIVY 240 RGEHNHPKPQ PPKRNLSDGH RRRAICDDTS KETNNPAWSN QHPQMSEAYV CRIENQNDGG 300 LTIHSSKVPC FYDPIVAAGM HTAVSNSEDS AEGSKNLKAT CDEQKSKRRK IKCPSSGAGT 360 SGESTFPYIP NQSTTNSEIT EDGFRWRKYG QKVVKGSSYP RSYYRCTSPK CSVRKFVEGT 420 TDDPRAFITT YEGKHYHGVP NRRPNSEASK TSSKSSAMKE KL

Sequence ? help Back to Top

Protein Sequence Length: 462 aa Download sequence

MEVNEAAKIP IARPVASRPR CPVYKSFSEL LTGAVDISST NVHSEMAITA IRPKTIRLKP  60
ATNHALVGEP SSQVGVSEAP VGFGSDNILQ SVKKPKVLYK PIAKLAPRKT IPLLENKGSS  120
VSDQQRVIDE AHIQSANEVK QQHDPTTESK QSLSAKSGQD KKKVRSTIVS GSTEEVAQSL  180
INTSNVDRPS YDGYNWRKYG QKQVKGSEYP RSYYKCTHLK CPVKKKVERS YDGQITEIVY  240
RGEHNHPKPQ PPKRNLSDGH RRRAICDDTS KETNNPAWSN QHPQMSEAYV CRIENQNDGG  300
LTIHSSKVPC FYDPIVAAGM HTAVSNSEDS AEGSKNLKAT CDEQKSKRRK IKCPSSGAGT  360
SGESTFPYIP NQSTTNSEIT EDGFRWRKYG QKVVKGSSYP RSYYRCTSPK CSVRKFVEGT  420
TDDPRAFITT YEGKHYHGVP NRRPNSEASK TSSKSSAMKE KL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	93	109	KKPKVLYKPIAKLAPRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37260.1	4e-87	WRKY family protein