PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT36770.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB_related
Protein Properties Length: 300aa    MW: 32931.1 Da    PI: 8.6259
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT36770.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.73.2e-143983147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     r +WT+eE++++++a +++  + Wk+I   +g  +t  q++s+ qky
       PHT36770.1 39 RESWTEEEHDKFLEALQLFDRD-WKKIEDFVG-SKTVIQIRSHAQKY 83
                     789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MNSSSTNACS SSSMANNSST PTDASGKKVR KPYTITKSRE SWTEEEHDKF LEALQLFDRD  60
WKKIEDFVGS KTVIQIRSHA QKYFLKVQKN GSIAHVPPPR PKRKAAHPYP QKAPKNVLVP  120
LQASMGYPSS MNSLPPGYPS WDDTSVLINS PTGGVMSSQD EYHLQRIQAD IGSKGATLIG  180
NSSISGIRSS NRAAPNSELP EQSKLDSVPH GIPDFAEVYN FIGSVFDPDT RGHVQKLKEM  240
DPINFETVLL LMRNLTMNLA SPDFEPIKNV LSTYDLNTKV VGLPTGGAVS NHNDLSCQTI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G09600.11e-106MYB_related family protein