PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT36421.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

FAR1

Protein Properties

Length: 807aa MW: 92539.4 Da PI: 8.1997

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT36421.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	59.4	1.1e-18	54	129	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +Y++YA++ GF++r+ + ++s+ +g++++r++vCskeg++++ +rtgC a ++v++ + +gkw+++++++eHnH++ PHT36421.1 54 WYSNYATKKGFRIRIGQLYRSRIDGSVMSRRYVCSKEGFQTS--------------SRTGCPAFIRVQRVDdSGKWVLANVNKEHNHAME 129 7************************************876..............589******999*************985 PP
2	FAR1	63.1	8.1e-20	242	317	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY++YA ++GF+vr+ + +sk++g+it+r+fvCskeg++++ +r+gC a ++++++ +g+w v+++++eHnHel PHT36421.1 242 EFYHSYAVNTGFRVRIGQLFRSKNDGSITSRRFVCSKEGHQHP--------------SRVGCGAFMRIQRQATGRWLVDRCHNEHNHELG 317 6************************************9998..............4899*************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 807 aa Download sequence
MSNTMTVKAK PTTTEQLAIS TIVKNHDQNH NHHDEEGEPN VGLEFDTAED AQEWYSNYAT 60 KKGFRIRIGQ LYRSRIDGSV MSRRYVCSKE GFQTSSRTGC PAFIRVQRVD DSGKWVLANV 120 NKEHNHAMEN ADETCVPKIV QRKVVVDRTV KLKSKSSSGL RSFDDDGPSS RSGVVDFKRV 180 VNQTTKLKSS TGLRSLDEDD GLSGRCGVID FKRVRRERVN GESRGGEPYK GLEFVTAGEA 240 YEFYHSYAVN TGFRVRIGQL FRSKNDGSIT SRRFVCSKEG HQHPSRVGCG AFMRIQRQAT 300 GRWLVDRCHN EHNHELGPPG DVSERVSLKG FKEEGSCELE NMDLVESNGG LSLVTRSRES 360 RIGSDWYNEL FDYFQSRQAE DMGFFYAVEV HKGRAMSVLW ADSRSRFACT QFGDAVVFDT 420 TYRRGSCLVP LALFVGVNHH RQPVLLGCAL IAEESEESFT WVFQAWLRAM SGRCPISIVA 480 DQDRAIQHSV AQVFPGTHHR FSPWQVVAKE QEAIGALRSM NPEFKYEYET CISQSQTPNE 540 FEAAWNVLIN KYNLRENTWL KEMYNMRKSW VPLYIRGTFF AGIPMDGSFK SYFGNILTSQ 600 APLCEFIIRY EKSLEQRREE ERKEDFNSFN LQPVLHTKDP IEDQGRRLYT ITMFKVFQKE 660 LLECYSYVAI KINVEGAISR YLVQKCGNGD ERNTVAFNAS NLNISCSCKM FEFEGVLCRH 720 ALKVFQIMNI RELPSRYILH RWTKDAKYGI LRDVDSGGTS QDYKALMLWS LREEAKNYIE 780 AGTTSLERYK LAFEIMQEGR RNLCWQN

Sequence ? help Back to Top

Protein Sequence Length: 807 aa Download sequence

MSNTMTVKAK PTTTEQLAIS TIVKNHDQNH NHHDEEGEPN VGLEFDTAED AQEWYSNYAT  60
KKGFRIRIGQ LYRSRIDGSV MSRRYVCSKE GFQTSSRTGC PAFIRVQRVD DSGKWVLANV  120
NKEHNHAMEN ADETCVPKIV QRKVVVDRTV KLKSKSSSGL RSFDDDGPSS RSGVVDFKRV  180
VNQTTKLKSS TGLRSLDEDD GLSGRCGVID FKRVRRERVN GESRGGEPYK GLEFVTAGEA  240
YEFYHSYAVN TGFRVRIGQL FRSKNDGSIT SRRFVCSKEG HQHPSRVGCG AFMRIQRQAT  300
GRWLVDRCHN EHNHELGPPG DVSERVSLKG FKEEGSCELE NMDLVESNGG LSLVTRSRES  360
RIGSDWYNEL FDYFQSRQAE DMGFFYAVEV HKGRAMSVLW ADSRSRFACT QFGDAVVFDT  420
TYRRGSCLVP LALFVGVNHH RQPVLLGCAL IAEESEESFT WVFQAWLRAM SGRCPISIVA  480
DQDRAIQHSV AQVFPGTHHR FSPWQVVAKE QEAIGALRSM NPEFKYEYET CISQSQTPNE  540
FEAAWNVLIN KYNLRENTWL KEMYNMRKSW VPLYIRGTFF AGIPMDGSFK SYFGNILTSQ  600
APLCEFIIRY EKSLEQRREE ERKEDFNSFN LQPVLHTKDP IEDQGRRLYT ITMFKVFQKE  660
LLECYSYVAI KINVEGAISR YLVQKCGNGD ERNTVAFNAS NLNISCSCKM FEFEGVLCRH  720
ALKVFQIMNI RELPSRYILH RWTKDAKYGI LRDVDSGGTS QDYKALMLWS LREEAKNYIE  780
AGTTSLERYK LAFEIMQEGR RNLCWQN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06250.1	0.0	FAR1 family protein