PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT36331.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family C2H2
Protein Properties Length: 191aa    MW: 22209.7 Da    PI: 6.0676
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT36331.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.50.000113658123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y+C+ C++ F++   L  H++ H
  PHT36331.1 36 YECNFCKRGFTNAQALGGHMNIH 58
                99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    
MASEKNNNYS DSSSEDTMDR ESEKFNDDNT GMGRSYECNF CKRGFTNAQA LGGHMNIHRK  60
DKLKAKQNNS HHHQESTSRK LSQQEANYYA FDNSRYSAPN SSTHDEQHHY SRAQMNSYQF  120
FFQLPQNPSY QHVYNNHHDD SRSRHDNCYD ANNLSLRIGP TLVDDDEEDQ GGKKNVDVEL  180
DLELRLGYNN Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17810.14e-18C2H2 family protein