PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT36080.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 328aa    MW: 36632 Da    PI: 5.2452
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT36080.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.95.6e-112542941055
                 HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 r+RR+riN+++  L++l+P+      +K++ +++Le+Av+Y+k Lq
  PHT36080.1 254 RKRRERINERLKILQSLVPNG-----TKVDISTMLEEAVQYVKFLQ 294
                 9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MEPVASMSEG DWSSFSGMCF TEEADFMAQF LGNCSLPNEL PGSSNYGASS SFWNGHDHES  60
NMNMEGVPMY SSNDSMYSGG SGILFHPPSH ETYYPSYSRP ILMRNDSSIT TEHGVMDASN  120
PIEGDDFLNQ DVSNDSMEFD VNMNEAVLDG KRVLQLGRID YEIFPRDKMD HSPSDSSKKR  180
ARLHGPAGNN KRSTKLQMDL KTGEMDGKNK AVLQRQNSVI SCCSVDESNV SLKLTQKSRA  240
SRGSATDPQS LYARKRRERI NERLKILQSL VPNGTKVDIS TMLEEAVQYV KFLQLQIKLL  300
SSDDLWMYAP IAYNGMDIGL DRRIGVPK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.16e-63bHLH family protein