PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT36052.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

GeBP

Protein Properties

Length: 414aa MW: 46084.3 Da PI: 4.5126

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT36052.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	113.5	1.3e-35	104	204	1	97
DUF573 1 klfqrlwseeDeivlLqGlidfkaktgk....spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskki 95 klfqrlw++eDei lLqG++++++++g s ++d++afy+++k++++++++k+qlveK+rrLKkK+++ ++k+ sgke++f+++hdq +f++s ki PHT36052.1 104 KLFQRLWTDEDEIELLQGFLEYTTQRGGinssSHHHDTTAFYDQIKSRLQLDFNKNQLVEKLRRLKKKYRNVMSKMGSGKEFVFKSSHDQATFDISCKI 202 579*********************9877644555************************************************************* PP DUF573 96 Wg 97 W PHT36052.1 203 WS 204 *6 PP

Sequence ? help Back to Top
Protein Sequence Length: 414 aa Download sequence
MASVEEDQHT VHNDDDLEDD EDDEEGGCPP QNEVVVDEDD DVDVDDDEDS TSTPPVPVSN 60 HFGSREVTIA VVGEPKRQRI NEFPVATTTV VEEKKPLAFD DSRKLFQRLW TDEDEIELLQ 120 GFLEYTTQRG GINSSSHHHD TTAFYDQIKS RLQLDFNKNQ LVEKLRRLKK KYRNVMSKMG 180 SGKEFVFKSS HDQATFDISC KIWSNTAPIV IRSSAPPPQE DGGFDDVDSH LNLNANFIDH 240 SPNINLNPNP DGIDVKTPRS RKRSRGGAVQ VEEKPGFIQQ YYQPSGGGTN VILPMSSSPA 300 LMPTTVPMAA PPLTATAASI PGLIEETVRS CLSPILKELL NNVTNLNGSR SFGFGIALGP 360 TPLGFGSSAV SSDMKLDEKW RKQQMLELEV YLRRLELVQD QIKAQLEELR SMTS

Sequence ? help Back to Top

Protein Sequence Length: 414 aa Download sequence

MASVEEDQHT VHNDDDLEDD EDDEEGGCPP QNEVVVDEDD DVDVDDDEDS TSTPPVPVSN  60
HFGSREVTIA VVGEPKRQRI NEFPVATTTV VEEKKPLAFD DSRKLFQRLW TDEDEIELLQ  120
GFLEYTTQRG GINSSSHHHD TTAFYDQIKS RLQLDFNKNQ LVEKLRRLKK KYRNVMSKMG  180
SGKEFVFKSS HDQATFDISC KIWSNTAPIV IRSSAPPPQE DGGFDDVDSH LNLNANFIDH  240
SPNINLNPNP DGIDVKTPRS RKRSRGGAVQ VEEKPGFIQQ YYQPSGGGTN VILPMSSSPA  300
LMPTTVPMAA PPLTATAASI PGLIEETVRS CLSPILKELL NNVTNLNGSR SFGFGIALGP  360
TPLGFGSSAV SSDMKLDEKW RKQQMLELEV YLRRLELVQD QIKAQLEELR SMTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28040.1	4e-67	GeBP family protein