PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT35668.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | bHLH | ||||||||
Protein Properties | Length: 185aa MW: 20974.2 Da PI: 10.0287 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 25.4 | 2.6e-08 | 16 | 65 | 6 | 54 |
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 + +E++RR+++++ ++L ++lP+ +s +++ + Av+YI sL PHT35668.1 16 KYVEKNRRNHMKNLCNQLHSMLPThPSTSKGTTTAVPDQIDAAVNYIESL 65 568*********************88777777788899*********998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 185 aa Download sequence |
MERHMKRKSG PKLERKYVEK NRRNHMKNLC NQLHSMLPTH PSTSKGTTTA VPDQIDAAVN 60 YIESLKMNLE KNKKHLEELK MGPKKAQSSN TTNEPGPSSK PPPQIEFHEM GPNMVVVLIT 120 SLDNIATFNK IIRLCHEEGV EVVSTNFKLN GNSTLQISHE SKVHINKSST IEFKETTLCT 180 KMKEL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G20970.1 | 2e-13 | bHLH family protein |