PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT35519.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

HB-other

Protein Properties

Length: 539aa MW: 58972.3 Da PI: 4.598

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT35519.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	18.4	3.8e-06	13	74	6	55
S--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC..........TS-HHHHHHHHHHHHHHH CS Homeobox 6 tftkeqleeLeelFek..nrypsaeereeLAkkl..........gLterqVkvWFqNrRake 55 +f++++++e+e+ + + p ++ LA+k ++ +qV +WFqNrR+ PHT35519.1 13 RFNPTEVTEMEAILQAhnVQMPAKQVLDNLAEKFsssaersgkfVVQAKQVWNWFQNRRYAI 74 588888999999998544788999999999999999999999999**************865 PP

Sequence ? help Back to Top
Protein Sequence Length: 539 aa Download sequence
MGRPPSNGGP SFRFNPTEVT EMEAILQAHN VQMPAKQVLD NLAEKFSSSA ERSGKFVVQA 60 KQVWNWFQNR RYAIRAKQTK SPGRFIAPLA FQSDPAAVKA PAKLSASPMP QSDPAAVRIM 120 PQAAQPVPSS QATVRTMPQA PQPLPAPSVP VQNVGRSVSD NTQMEFEAKS ARDGAWYDVA 180 NFLSHRSVES GEPEVLVRFA GFGAEEDEWV NVRKHVRQRS LPCEASECVA VLPTDLILCF 240 QEGKDQALYY DAHVLDAQRR RHDVRGCRCR FLVRYDHDQS EEIVPLRKVC RRPETDFRLQ 300 QLNTESLKQQ KLGNDPTTKV YPPADTPQKA QTESRMKQAE PTQKQPAPEN TIKTEPDVAP 360 TLQKPSTDSL TGNTLSETTP ELMEETTERP VAETAEAPRE EKNEMHLAEV AKQAPAEAPE 420 QPPAETTLKP PATSTSKPDE AQEQPPAETT PEPPASSTSN PDEAPKEPPA ETTSSEEPPA 480 DSTSKPAEAS VEPSAETTIE PPVDSTSMPV EASEEQTKTE EHTDAGAATA STDQDDAPV

Sequence ? help Back to Top

Protein Sequence Length: 539 aa Download sequence

MGRPPSNGGP SFRFNPTEVT EMEAILQAHN VQMPAKQVLD NLAEKFSSSA ERSGKFVVQA  60
KQVWNWFQNR RYAIRAKQTK SPGRFIAPLA FQSDPAAVKA PAKLSASPMP QSDPAAVRIM  120
PQAAQPVPSS QATVRTMPQA PQPLPAPSVP VQNVGRSVSD NTQMEFEAKS ARDGAWYDVA  180
NFLSHRSVES GEPEVLVRFA GFGAEEDEWV NVRKHVRQRS LPCEASECVA VLPTDLILCF  240
QEGKDQALYY DAHVLDAQRR RHDVRGCRCR FLVRYDHDQS EEIVPLRKVC RRPETDFRLQ  300
QLNTESLKQQ KLGNDPTTKV YPPADTPQKA QTESRMKQAE PTQKQPAPEN TIKTEPDVAP  360
TLQKPSTDSL TGNTLSETTP ELMEETTERP VAETAEAPRE EKNEMHLAEV AKQAPAEAPE  420
QPPAETTLKP PATSTSKPDE AQEQPPAETT PEPPASSTSN PDEAPKEPPA ETTSSEEPPA  480
DSTSKPAEAS VEPSAETTIE PPVDSTSMPV EASEEQTKTE EHTDAGAATA STDQDDAPV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18380.3	1e-125	HB-other family protein