PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT35149.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | ARF | ||||||||
Protein Properties | Length: 688aa MW: 76089 Da PI: 8.2875 | ||||||||
Description | ARF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 76.9 | 2.2e-24 | 113 | 214 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f k+lt+sd+++ g +++p+ +ae++ ++ + t++ +d +g++W++++iyr++++r++lt+GW+ Fv++++L +gD++vF + +++el PHT35149.1 113 FAKTLTQSDANNGGGFSVPRYCAETIfprldytADPPVQ--TVIAKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFL--RAENGEL 207 89****************************997556555..8************************************************..449999* PP EEEEE-S CS B3 93 vvkvfrk 99 +v+++r+ PHT35149.1 208 CVGIRRA 214 *****97 PP | |||||||
2 | Auxin_resp | 116.6 | 2.1e-38 | 271 | 354 | 1 | 83 |
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa a+++++FevvY+Pra t+eF+vk+++v++a++++++ GmRfkmafetedss++++ +Gt+++++ +dp+rWpnS+Wr+L+ PHT35149.1 271 AAYLAASGQPFEVVYYPRANTPEFCVKASSVNAAMRIQWCSGMRFKMAFETEDSSRISWfMGTISSIQVADPIRWPNSPWRLLQ 354 577899****************************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 688 aa Download sequence |
MKEVLEKCVD SQLWHACAGG MVQVPAVNSK VYYFPQGHAE HALTNVDFSG IPRSPALILC 60 RVAAVRFLAD PETDEVYARI RAVPVGNKGN DYDDDDDILG SNESGTAEKP NSFAKTLTQS 120 DANNGGGFSV PRYCAETIFP RLDYTADPPV QTVIAKDVHG ETWKFRHIYR GTPRRHLLTT 180 GWSTFVNQKK LVAGDSIVFL RAENGELCVG IRRAKRGGSG GPETPSGWNS ASGNYGGFSA 240 FLREDMNKNG NLSVGSFRGK GRVRPESVVE AAYLAASGQP FEVVYYPRAN TPEFCVKASS 300 VNAAMRIQWC SGMRFKMAFE TEDSSRISWF MGTISSIQVA DPIRWPNSPW RLLQVSWDEP 360 DLLQNVKHVS PWLVELVSNM PVIHLSPFSP PRKKLRLPPD FSLDNQFTLP SFSGNPLRSS 420 SPFCCPSDNI TAGIQGARHA QFGVPLLDLH LSNKIQSGQL APSFQRVVAD SQRSNVINKY 480 QNDRNDNISC LLTIGTSSKI SEKKDSVITP RFLLFGQPIL TEQQISSRCS VNAPEVQSRK 540 DLGRIQLKSE RFPPEQISSA AFFWNRGYHA AELGVDTGHC KVFLESEDVG HTLDLSVLGS 600 YEELYRRLAY MFGLERLDML TRVLYHDATG AVKHTGDEPF SDFVKSAKRL TVLMNSSSSI 660 KRKWITGLAT AERGLDSSNQ AGPLSIFA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28350.1 | 0.0 | ARF family protein |