PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT34973.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

E2F/DP

Protein Properties

Length: 449aa MW: 49806.5 Da PI: 4.495

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT34973.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	85.9	3.1e-27	128	193	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l++++e+g+++ln++a++L +v ++RRiYDi+NVLe+++liek+ kn+i+wkg PHT34973.1 128 RYDSSLGLLTKKFINLIKHAEDGMLDLNKAADTL---QV--QKRRIYDITNVLEGIGLIEKTLKNRIQWKG 193 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 449 aa Download sequence
MIPQQQQQQQ QQSLKRQLQF SSIKPVCGDY HRFSNDPVHG SFQEPPGIVV KTPPLKRKST 60 ATTYGQEVGD RNPVSGSANV NSPMQTPMSG KDVQKVLRTS KAKSASQADN SNVGSPSGND 120 VTPAGPCRYD SSLGLLTKKF INLIKHAEDG MLDLNKAADT LQVQKRRIYD ITNVLEGIGL 180 IEKTLKNRIQ WKGLDVSKPG EANESVASLQ AEVEKLTIKE HKLDDQIREM QERLRGLSED 240 ENNQRWLFVT EDDIKSLPCF QNETLIAIKA PHGTTLEVPD PDEAVDYPQR RYRIVLRSTM 300 GPIDVYLVSQ FEEKFEEVNA VEAPPSVPST SGLNENATAT LDTEENREVD IVTEEKENQR 360 VCSDVGTSQD FITGMMKIVP DVDNEADYWL LSDADVSITD MWKTESAIDW NELDVIQEDY 420 SIANVSTPRA QTPPPSTAEV PSAGNTTGC

Sequence ? help Back to Top

Protein Sequence Length: 449 aa Download sequence

MIPQQQQQQQ QQSLKRQLQF SSIKPVCGDY HRFSNDPVHG SFQEPPGIVV KTPPLKRKST  60
ATTYGQEVGD RNPVSGSANV NSPMQTPMSG KDVQKVLRTS KAKSASQADN SNVGSPSGND  120
VTPAGPCRYD SSLGLLTKKF INLIKHAEDG MLDLNKAADT LQVQKRRIYD ITNVLEGIGL  180
IEKTLKNRIQ WKGLDVSKPG EANESVASLQ AEVEKLTIKE HKLDDQIREM QERLRGLSED  240
ENNQRWLFVT EDDIKSLPCF QNETLIAIKA PHGTTLEVPD PDEAVDYPQR RYRIVLRSTM  300
GPIDVYLVSQ FEEKFEEVNA VEAPPSVPST SGLNENATAT LDTEENREVD IVTEEKENQR  360
VCSDVGTSQD FITGMMKIVP DVDNEADYWL LSDADVSITD MWKTESAIDW NELDVIQEDY  420
SIANVSTPRA QTPPPSTAEV PSAGNTTGC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22220.2	1e-155	E2F/DP family protein