PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT34869.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

MYB_related

Protein Properties

Length: 360aa MW: 38981.8 Da PI: 5.651

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT34869.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	46.6	8.1e-15	87	131	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++++ +++G+g+W++I+r + + Rt+ q+ s+ qk+ PHT34869.1 87 PWTAEEHRLFLQGLAKYGKGDWRAISRNFVLSRTPTQVASHAQKF 131 7******************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MSLDQTCKRS SWTKEENKAF ENALADYSGD RNLIQQIAAA VPGKSLEEVI EHYLVLVEDI 60 KDIESGIVPL PKYRRMQSST ERRKGIPWTA EEHRLFLQGL AKYGKGDWRA ISRNFVLSRT 120 PTQVASHAQK FYTRLNDKNN PKKRSIHDVT SAADITEPSQ GPCGGQLQWP ITNYVTDAFN 180 TGMLSIPEPV TTRISTDAIE GASAADLEKI PIGAAVGNEL NSSFPGMVEF VQSIEGHIIV 240 PAEVPSGVCH GVDTKTSPSH SLQPSIAGGS GMYIPSFNNV RYDLTALMSK QLFGSSQVGP 300 TVNSASLPLS IVDRIGVQDC IASPSIPGSS SGGTYPCWNP SNIDDNTFDL VNLFPDGLGK

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MSLDQTCKRS SWTKEENKAF ENALADYSGD RNLIQQIAAA VPGKSLEEVI EHYLVLVEDI  60
KDIESGIVPL PKYRRMQSST ERRKGIPWTA EEHRLFLQGL AKYGKGDWRA ISRNFVLSRT  120
PTQVASHAQK FYTRLNDKNN PKKRSIHDVT SAADITEPSQ GPCGGQLQWP ITNYVTDAFN  180
TGMLSIPEPV TTRISTDAIE GASAADLEKI PIGAAVGNEL NSSFPGMVEF VQSIEGHIIV  240
PAEVPSGVCH GVDTKTSPSH SLQPSIAGGS GMYIPSFNNV RYDLTALMSK QLFGSSQVGP  300
TVNSASLPLS IVDRIGVQDC IASPSIPGSS SGGTYPCWNP SNIDDNTFDL VNLFPDGLGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08520.1	1e-54	MYB family protein