PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT34562.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

CAMTA

Protein Properties

Length: 816aa MW: 92319.9 Da PI: 5.5854

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT34562.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	153.3	5.5e-48	96	202	3	116
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcyw 100 +e + rwlk+ e++ iL n+e+h+ +sgsl+L+n++++r+frkDG+sw+kkkdg+tv E+he+LKvg+ e+l+cyYah+e+np+fqrr+yw PHT34562.1 96 REaQIRWLKPAEVLFILRNHENHQ--------LSSGSLFLFNKRVLRFFRKDGHSWRKKKDGRTVGEAHERLKVGNAEALNCYYAHGEQNPNFQRRSYW 186 55589**************988........789************************************************************ PP CG-1 101 lLeeelekivlvhyle 116 +L+ ++++ivlvhy++ PHT34562.1 187 MLDPAYDHIVLVHYRD 202 ************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 816 aa Download sequence
MGCGAADGVG CSTLNQRSRF GPGHGENSVG SATPRMGPYP VRIRISRTPM QVQIPAPAEK 60 YTLAVFFPSF LALVGKVTWW LSWWEVAGYD INDLVREAQI RWLKPAEVLF ILRNHENHQL 120 SSGSLFLFNK RVLRFFRKDG HSWRKKKDGR TVGEAHERLK VGNAEALNCY YAHGEQNPNF 180 QRRSYWMLDP AYDHIVLVHY RDITEGRQNP VFMSESSPIS SAFSPSPRSY STQHTGSTVI 240 ASESYELYQN QSSPGEICSD AVINNSGTSD TTGRTEEAIS SPGLEMSQAL RRLEEQLSLN 300 DDSFKEIDPL YADAINDDSS FIQMQGNSNG LLLQHRSGLS FSYINIFVEC ILTCLFLARY 360 VYDNAIHFNF VQRIANTFIT SRISLPPYSP PHHCYNFPFA FVCTAITLIV PAFQSLTRTS 420 RHSVTGCFFI KFKHATIYSE SSECHHQDLT QDSDMWKDML DDYGVSAAAE SQTKYLHKLD 480 ENAMLQISSE RCAIETYGSY KWPYFSDKEA PTAQVPDFKQ LEDFKYPTYP PDINTFGSNP 540 DKYTTLFDQD HIGTSLEDEV SLTIAQKQKF TIRDISPDWG YSSEATKVVI IGSFLCNPSE 600 CTWTCMFGDI EVPVQIIQEG VICCQAPRHL PGKVTLCVTS GNRESCSEVR EFEYRVEPDD 660 CARNNQPDVV GAYQSSEELL LLVRFVQLLL SDLSVQKGDS SELANDFLEK SKANEDSWSQ 720 VIESLLFGTS TSMITIDWLL QELLKDKFQQ WLYCKLQQKD NQIGCSLSKK EQGIIHMVAG 780 LGYEWALHPI LNAGLSVNFR DINGWTALHW AARFGR

Sequence ? help Back to Top

Protein Sequence Length: 816 aa Download sequence

MGCGAADGVG CSTLNQRSRF GPGHGENSVG SATPRMGPYP VRIRISRTPM QVQIPAPAEK  60
YTLAVFFPSF LALVGKVTWW LSWWEVAGYD INDLVREAQI RWLKPAEVLF ILRNHENHQL  120
SSGSLFLFNK RVLRFFRKDG HSWRKKKDGR TVGEAHERLK VGNAEALNCY YAHGEQNPNF  180
QRRSYWMLDP AYDHIVLVHY RDITEGRQNP VFMSESSPIS SAFSPSPRSY STQHTGSTVI  240
ASESYELYQN QSSPGEICSD AVINNSGTSD TTGRTEEAIS SPGLEMSQAL RRLEEQLSLN  300
DDSFKEIDPL YADAINDDSS FIQMQGNSNG LLLQHRSGLS FSYINIFVEC ILTCLFLARY  360
VYDNAIHFNF VQRIANTFIT SRISLPPYSP PHHCYNFPFA FVCTAITLIV PAFQSLTRTS  420
RHSVTGCFFI KFKHATIYSE SSECHHQDLT QDSDMWKDML DDYGVSAAAE SQTKYLHKLD  480
ENAMLQISSE RCAIETYGSY KWPYFSDKEA PTAQVPDFKQ LEDFKYPTYP PDINTFGSNP  540
DKYTTLFDQD HIGTSLEDEV SLTIAQKQKF TIRDISPDWG YSSEATKVVI IGSFLCNPSE  600
CTWTCMFGDI EVPVQIIQEG VICCQAPRHL PGKVTLCVTS GNRESCSEVR EFEYRVEPDD  660
CARNNQPDVV GAYQSSEELL LLVRFVQLLL SDLSVQKGDS SELANDFLEK SKANEDSWSQ  720
VIESLLFGTS TSMITIDWLL QELLKDKFQQ WLYCKLQQKD NQIGCSLSKK EQGIIHMVAG  780
LGYEWALHPI LNAGLSVNFR DINGWTALHW AARFGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	6e-87	CAMTA family protein