PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT34433.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

C2H2

Protein Properties

Length: 176aa MW: 20148.2 Da PI: 9.4335

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT34433.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12	0.00066	48	70	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k+F++ L H +H PHT34433.1 48 FECKTCNKRFPSFQALGGHRTSH 70 89**********99998888777 PP
2	zf-C2H2	15	6.9e-05	90	112	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++Cg+ Fs L H+r+H PHT34433.1 90 HKCSICGMEFSLGQALGGHMRRH 112 79********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 176 aa Download sequence
MTTMKRSRED DMHIETEAMA NCALMLLSHF NNNKNDNNTS SSNYHNDFEC KTCNKRFPSF 60 QALGGHRTSH NKRIRLLGEF LVQTKKNKMH KCSICGMEFS LGQALGGHMR RHRDEINKIS 120 TMAIEKTMIP VLKKSNSSKR ICGLDLNLTP RDDHVDDDLM LWPTAPIASP VLRIFI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37430.1	2e-35	C2H2 family protein