PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT33801.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

C2H2

Protein Properties

Length: 328aa MW: 37411.4 Da PI: 8.144

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT33801.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	23.4	1.5e-07	166	188	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++Cgk F+r nL+ H+r H PHT33801.1 166 HYCQICGKGFKRDANLRMHMRAH 188 68*******************99 PP
2	zf-C2H2	10.7	0.0017	258	281	1	23
EEETTTT.EEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCg.ksFsrksnLkrHirtH 23 y+C+ C+ k Fs s+L++H + + PHT33801.1 258 YVCKRCNkKQFSVLSDLRTHEKHC 281 9*******************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 328 aa Download sequence
MFVSHDDQTL THYPHESTSV AIANMGTLIQ EIITIASSLM FSCQKIALDP SSANQNSSIF 60 REPSQMIKIQ DDGHGRGVGQ MDHLLQDYNW YEENYNYCNT HEDNKNHVTS SIIASNAISS 120 HDFDSKEFGK REVLLSTSKG KVHVNNEDNY DIIELDASDL LAKYTHYCQI CGKGFKRDAN 180 LRMHMRAHGD EYKSSAALSN PLKKNNHDYV SQLIGNKIKY SCPQEGCKWN KKHAKFQPLK 240 SMVCVKNHYK RSHCPKMYVC KRCNKKQFSV LSDLRTHEKH CGDLKWQCSC GTTFSRKDKL 300 MGHVSLFVGH TPLIKESILN LDELDLNA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22890.1	1e-89	C2H2 family protein