PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT33657.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 477aa MW: 54148.4 Da PI: 4.4847

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT33657.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	25.7	2.1e-08	321	366	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 +Er+RR+++ + +++Lr l+P+ +K ++ Le+ v+Y+k+L PHT33657.1 321 DVERQRRRDMAKLYQRLRLLIPSkY---LMGKRAISDHLEEIVDYVKDL 366 69*******************77...999**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 477 aa Download sequence
MDDFELDFDQ LDQLLNILSP PTLQKQDSSI PLQTQICNDI DSHQKNKPVI TTTTIDDDQL 60 LNFLSSPPSP RPPLTSTRQK DDDDLSILLQ THSSNDLDSR QNDEPIIATT TTIFDDNQLL 120 NFLSSPPPSP RPPLTSTRQK DDDDLSILLQ THSCNDLDSQ QNDEPIITTT TTIFDDDQLF 180 NFLSSPPASP RPPLTSTLQK DDYSSILLQT HSSNDLDSHQ NDEPIITTTT TTIFDDDQLF 240 NFLSTPSPSP HPPLTSTLQK EDDSSISLQT RQSSNDLDNH QKDEPINTTT TIVDDNQVQD 300 PMKKKEVEEK KKKNKNVLRR DVERQRRRDM AKLYQRLRLL IPSKYLMGKR AISDHLEEIV 360 DYVKDLRKDI EELERKRESL KEKKNMTPSS SSSMKLSDDE DRIIVKSCNE EVEISVKGGI 420 PISKVVKVVM KEGLIVNSCV SSTVDQSLHH IIQSEVNTRA DIDFAMLQTK LISLYEP

Sequence ? help Back to Top

Protein Sequence Length: 477 aa Download sequence

MDDFELDFDQ LDQLLNILSP PTLQKQDSSI PLQTQICNDI DSHQKNKPVI TTTTIDDDQL  60
LNFLSSPPSP RPPLTSTRQK DDDDLSILLQ THSSNDLDSR QNDEPIIATT TTIFDDNQLL  120
NFLSSPPPSP RPPLTSTRQK DDDDLSILLQ THSCNDLDSQ QNDEPIITTT TTIFDDDQLF  180
NFLSSPPASP RPPLTSTLQK DDYSSILLQT HSSNDLDSHQ NDEPIITTTT TTIFDDDQLF  240
NFLSTPSPSP HPPLTSTLQK EDDSSISLQT RQSSNDLDNH QKDEPINTTT TIVDDNQVQD  300
PMKKKEVEEK KKKNKNVLRR DVERQRRRDM AKLYQRLRLL IPSKYLMGKR AISDHLEEIV  360
DYVKDLRKDI EELERKRESL KEKKNMTPSS SSSMKLSDDE DRIIVKSCNE EVEISVKGGI  420
PISKVVKVVM KEGLIVNSCV SSTVDQSLHH IIQSEVNTRA DIDFAMLQTK LISLYEP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	310	320	KKKKNKNVLRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51790.1	2e-14	bHLH family protein