PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT33576.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 355aa    MW: 40090.8 Da    PI: 6.0128
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT33576.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH45.21.7e-1474121455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+e E+rRR++iN++f++Lr l+P+      +K + a+ L ++++Y+++Lq
  PHT33576.1  74 KHSETEKRRRSKINERFQTLRNLMPQT----EQKRDNASFLLEVIQYVQYLQ 121
                 79************************8....799999**************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    
MNELIYCFNL VGFFNLCRKS FKKKKKMKSG KSHHEEEEEN EYDVGSNRDA TPSSNRTKVA  60
DGKNIDKANA IWSKHSETEK RRRSKINERF QTLRNLMPQT EQKRDNASFL LEVIQYVQYL  120
QETVQKYEGS NKPLSSAPSK FMPWRNSQWR AQSFPANPQA LKNGTDAGPT FSGWFDENLL  180
TETSSMQENQ HNPLESHPGV DVSYRSMDIE KDVVSSPIAT SMPIPTTMPV PVQSHSAFSD  240
LLPTLASDEW PSAANALNNQ EFMIKDGTIS ISNTYSIALL DSFTQALETS CLDLSQTTLS  300
VQIKIGKQPF KGMGLGPSVS KDTENPPPAG DQFMEEFQDT NNDEELERAQ KRLKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.18e-67bHLH family protein