PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT33572.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 327aa    MW: 36271.2 Da    PI: 5.1213
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT33572.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH452e-144493255
                HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                r +h+e E+rRR++iN++f+ Lr l+P+      +K + a+ L ++++Y+++Lq
  PHT33572.1 44 RSKHSETEKRRRSKINERFQMLRNLMPQT----EQKRDNASFLLEVIQYVQYLQ 93
                899*************************8....799999**************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MKSGKNHHEE EEENEYDVGS NKDATPSSNS TKDGKNIDKA NAIRSKHSET EKRRRSKINE  60
RFQMLRNLMP QTEQKRDNAS FLLEVIQYVQ YLQETVQKYE GSNQPLSSAP SKLMPWRNSQ  120
WCAQSYPANP QALKNGIDSG PTYPGWFDKN LLTDTSSIQA NQQNPLESHP GGDVSYRSMD  180
TEKDLVSRAI ATSMPTPTTM PVPVQSDSAF SDLLPTPASN VWPSATNALN NQEFVIEDGT  240
ISISNTYSKA LLDSFTQALE TSGLVLSQAT LSVQIKIGKQ PLKGMGLGPS VAKDTENPPP  300
AGDQFMEESK DTNNDEELDR AQKRLKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.16e-72bHLH family protein