PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT33571.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 329aa    MW: 36404.1 Da    PI: 5.6825
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT33571.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH48.91.1e-154695255
                HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                r +h+  E+rRR++iN++f++Lr l+P+     ++K + a+ L ++++Y+++Lq
  PHT33571.1 46 RSKHSVTEQRRRSKINERFQTLRNLIPHT----DQKRDTASFLSEVIQYVQYLQ 95
                899*************************8....8*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MKSGKGHHGE EEEDEYDVGS NRDATPSSNS TKVTEGKNSD KANAIRSKHS VTEQRRRSKI  60
NERFQTLRNL IPHTDQKRDT ASFLSEVIQY VQYLQETVQK YEGSYQPWNS EPTKLMPWRN  120
SHWRAHSFPA TPQALRNSTD TGPTYSGRFD ENLLTDTSAM QENQRNPLVS HPGGDVSYKS  180
MDQEKELVSR AIATSIPLQA SIPVPVQNDS AFSDLLPTPA SDECPSTTNA LNGQEFVIEG  240
GTISISSPYS PLLLSSFTQA LETAGLDLSQ ATVSVQINLG KQAFKGMSLG PSVAKDTENP  300
PPAGDQFVEK FRDTNNGEEL DRAQKRLKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.14e-80bHLH family protein