PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT33158.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB
Protein Properties Length: 290aa    MW: 34207.6 Da    PI: 6.8582
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT33158.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.35.5e-162673148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT eEd  l + ++++G g+W++ ar  g++Rt+k+c++rw++yl
       PHT33158.1 26 RGSWTIEEDFTLMNHIALHGEGRWNSLARSAGLKRTGKSCRLRWLNYL 73
                     89********************************************97 PP
2Myb_DNA-binding51.42.4e-1679122146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ T eE++l+++++ ++G++ W++Ia++++ gRt++++k++w++
       PHT33158.1  79 RGNITLEEQLLILQLHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 122
                      7999******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MDHYSQYVDN NNQKSDEETN NLDLKRGSWT IEEDFTLMNH IALHGEGRWN SLARSAGLKR  60
TGKSCRLRWL NYLRPDVRRG NITLEEQLLI LQLHSRWGNR WSKIAQHLPG RTDNEIKNYW  120
RTRVQKHAKQ LKCDVNSKQF KDTLHYLWIP RLVERIKAST NSNNNQVNNI QQTNYDNIII  180
NNNNNNNNIV QNIMNNFKQE NYSSTTTTSS ENSFGSTQIS DISDNCYTNY PLNQGDYHGE  240
ILINPTSDYF QHGIIDDNNH QQNMSQLFFD DVSDKFWNQE DMLFLQQQLN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06490.18e-79MYB family protein