PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT33013.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

HSF

Protein Properties

Length: 481aa MW: 53499.1 Da PI: 5.4646

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT33013.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	109.4	2.6e-34	23	113	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl k+ye+++d ++++++sw+ g+sfvv+++ efa+ +Lp+yFkh+nf+SF+RQLn+YgF+k++ e+ weF+++ F k++k+ll++i+ PHT33013.1 23 FLLKTYEMVDDTQTDDIVSWTPIGHSFVVWNPPEFARILLPTYFKHNNFSSFIRQLNTYGFRKIDPER---------WEFSNEDFLKDQKHLLKNIH 110 9**************************************************************999.........****************** PP XXX CS HSF_DNA-bind 99 rkk 101 r+k PHT33013.1 111 RRK 113 *98 PP

Sequence ? help Back to Top
Protein Sequence Length: 481 aa Download sequence
MDVISPAAAA GGGGGGGGGP APFLLKTYEM VDDTQTDDIV SWTPIGHSFV VWNPPEFARI 60 LLPTYFKHNN FSSFIRQLNT YGFRKIDPER WEFSNEDFLK DQKHLLKNIH RRKPIHSHSH 120 PPGSAVDPER AAFEEEIDKL SREKSGLEAN VVRFRQQQSA AKLQLEELTG RVGSIEQRQE 180 SLLTFVEKAI QNPDFVERLA QKLESMDISA FSKKRRLPQM DSTQPVQESM SVDNHSSSRV 240 EFGNLCHQDF SNKLTLELSP AVSDINVLSC STQSSNEDGG SPHRRISEGW SREVQLRTGV 300 LYTPEAIELS DTGTSFTLKI DSSLPLTSSN VEHSRLHSLP QSLTSNEEVD GHISCQLNLS 360 LASCLSQVDK NQYSERMPQI GQEIGKHSES QSDANDKTPP TNDKPLPPSH DATGNKQGPA 420 AAAPVRVNDV FWEQFLTERP GCSDNEEASS SYRGNSYDEQ DERKSNQGVA SNTRKVQHLT 480 L

Sequence ? help Back to Top

Protein Sequence Length: 481 aa Download sequence

MDVISPAAAA GGGGGGGGGP APFLLKTYEM VDDTQTDDIV SWTPIGHSFV VWNPPEFARI  60
LLPTYFKHNN FSSFIRQLNT YGFRKIDPER WEFSNEDFLK DQKHLLKNIH RRKPIHSHSH  120
PPGSAVDPER AAFEEEIDKL SREKSGLEAN VVRFRQQQSA AKLQLEELTG RVGSIEQRQE  180
SLLTFVEKAI QNPDFVERLA QKLESMDISA FSKKRRLPQM DSTQPVQESM SVDNHSSSRV  240
EFGNLCHQDF SNKLTLELSP AVSDINVLSC STQSSNEDGG SPHRRISEGW SREVQLRTGV  300
LYTPEAIELS DTGTSFTLKI DSSLPLTSSN VEHSRLHSLP QSLTSNEEVD GHISCQLNLS  360
LASCLSQVDK NQYSERMPQI GQEIGKHSES QSDANDKTPP TNDKPLPPSH DATGNKQGPA  420
AAAPVRVNDV FWEQFLTERP GCSDNEEASS SYRGNSYDEQ DERKSNQGVA SNTRKVQHLT  480
L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13980.1	1e-164	HSF family protein