PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT33007.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Protein Properties

Length: 327aa MW: 38119.2 Da PI: 5.9803

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT33007.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	94.5	7.2e-30	105	188	1	85
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 f+k+ltpsdv+k++rlv+pkk+a ++ + ++ +++++d+s +sW+++++y+k+s+++v+tkGW++Fvk++gL+++D++vF l PHT33007.1 105 FQKELTPSDVGKLNRLVIPKKYAMKYfpQ---IQDEEMIFYDTSRKSWKFRYCYWKSSQSFVFTKGWNKFVKDKGLRAKDTLVFNLC 188 99**********************633...35668*********************************************974 PP

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence
MAYDSAAIRV LGHEHAHRNL AWTNSTIQEP DFQTQFSTED ILRMIKEGSY TSKFDEYLKE 60 KFEDHFQSLK TLPTMAEEVT GSSLGNSLLQ KCEGNGAEFS YKQLFQKELT PSDVGKLNRL 120 VIPKKYAMKY FPQIQDEEMI FYDTSRKSWK FRYCYWKSSQ SFVFTKGWNK FVKDKGLRAK 180 DTLVFNLCEF KNVTKENCNA FVIDVVKCIE VLPMDLTLNH QQEQGQVEES IGDNEVKKKE 240 FMRAQTFDDH DVNDALEPIW LFGKQIVRYI QVHGMAPPDH LSEETVMVMD VMQQVRKPPE 300 QEHEKESNRE PSIDISESKH LGSLHSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51120.1	3e-60	RAV family protein