PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT32941.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | Trihelix | ||||||||
Protein Properties | Length: 453aa MW: 50916.5 Da PI: 5.6217 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 69.3 | 7.6e-22 | 126 | 223 | 1 | 85 |
trihelix 1 rWtkqevlaLiearremeerlrrgk............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdql 85 +Wt++ v++Li+++ ++++ + + +kk++W+ vs+ m++ g+++sp+qC++k+++lnkrykk++++ +++ ++ ++++ ++ d++ PHT32941.1 126 KWTDNVVRLLIQVVACVGDDGSLEGpevglkrksgciQKKGKWKTVSRLMMSNGCHVSPQQCEDKFNDLNKRYKKLNDILGRGtSCAVVENPSLMDSM 223 7**************7777777432245555666779**********************************************669999999998887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 453 aa Download sequence |
MNSSGMGGGF LSGYNGGFLG MNRLQQPQSI SNNAVHGHQT NHSNVQLSVS ANLGLEHDKP 60 IGLMDVKGCM AFGKDKAAGP SNVVNTGNNP NNNTSDEDEP SFTEDGNGDN NCGALGKKAS 120 PWQRMKWTDN VVRLLIQVVA CVGDDGSLEG PEVGLKRKSG CIQKKGKWKT VSRLMMSNGC 180 HVSPQQCEDK FNDLNKRYKK LNDILGRGTS CAVVENPSLM DSMPQLSDKA KDTVKKILNS 240 KHLFYREMCA YHNGQKIPDC NDLEFPVHSS PVASQCAKDH TGSQGHEAEE NDESDDDDEE 300 SDDEEDNHGN GDARRRVEED GSFQPQTSGN DNFLAEINEF FQDPTKSKWE QRMWIKKRML 360 QLEEEKVGIQ AEAFELEKRQ FKWQRFCQKK DRELEIERLE NERLMLENEH MKLQLKHKEH 420 EIVSAKSNIS FNSAPLCLDR PQGRDQIDAA RYH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G76870.1 | 7e-62 | Trihelix family protein |