PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT32679.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

DBB

Protein Properties

Length: 318aa MW: 35124.5 Da PI: 7.3969

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT32679.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	23.8	9.5e-08	4	42	5	37
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......H 37 C+ ++++e++ fC+ ++ lC+dC H+ H PHT32679.1 4 QCDVCNKNEASVFCTADEAALCDDCDHRVHHVnklaskH 42 7*************************9997323555555 PP
2	zf-B_box	26	1.9e-08	54	92	2	38
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg..Ht 38 ++++C+ ++e ++ lfC++++ +C++C l +Hk Ht PHT32679.1 54 QAPMCDICQERRAFLFCQQDRAIMCRECDLPIHKAneHT 92 7899*****************************878865 PP

Sequence ? help Back to Top
Protein Sequence Length: 318 aa Download sequence
MKIQCDVCNK NEASVFCTAD EAALCDDCDH RVHHVNKLAS KHQRFSLLQP SPKQAPMCDI 60 CQERRAFLFC QQDRAIMCRE CDLPIHKANE HTQKHNRYLL TGIKLSANST VYTCPSQSQS 120 KISSANSSVS NLKSQDPISK PVSASVSSTM TNTKAAAAAV VESVKVVKER AGGCNSGHLV 180 NAGGNGLTSS ISEYLEMLPG WHVEDFLDCS TPNGFSKNID DGDLLSFWDT DLESQLSSFP 240 PQNVGIWVPQ VPPPPQSKQE TQTQYFLPNL NFGGQIGLKE SREVTNIKSS RKWMDDNSFA 300 VPQINPSSTS FKRPRTLW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75540.1	3e-75	DBB family protein