PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT32304.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Trihelix

Protein Properties

Length: 666aa MW: 73927.7 Da PI: 6.6886

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT32304.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	91.2	1.1e-28	68	151	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW +qe+l L+++r++m+ +++++lk+plWeevs+km++ g++rs+k+Ckek+en+ k+++++keg+ ++ + +t+++fdql+ PHT32304.1 68 RWHRQETLSLLKIRSDMDVVFKDSSLKGPLWEEVSRKMADLGYHRSAKKCKEKFENVYKYHRRTKEGRASK--ADGKTYRFFDQLQ 151 8******************************************************************96..66678****98 PP
2	trihelix	100.9	1e-31	467	552	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k+e+ aLi +r+ ++ +++++ k+plWee+s+ mr+ g++r++k+Ckekwen+nk++kk+ke++kkr +e+s+tcpyf+qlea PHT32304.1 467 RWPKEEIDALISLRTCLDLKYQENGPKGPLWEEISAGMRKLGYNRNAKRCKEKWENINKYFKKVKESNKKR-PEDSKTCPYFNQLEA 552 8*******************************************************************8.99*********85 PP

Sequence ? help Back to Top
Protein Sequence Length: 666 aa Download sequence
MLGVSSTSTT PGRAVISAAP PLLPPPSQDA PESGGSSEGG GGDGGGGDVG VGGGGFSEEG 60 ERNSAGNRWH RQETLSLLKI RSDMDVVFKD SSLKGPLWEE VSRKMADLGY HRSAKKCKEK 120 FENVYKYHRR TKEGRASKAD GKTYRFFDQL QALENNPASH SLPPPPLAAP PITMAMAMAM 180 PMRSGNASVN PTPVPMPQNN AASSPQSLPF VVSHNNVVTA AVPAVNHPMM PALLLSQPQQ 240 QSQPAIQQPM ANLNQINQPQ GNTTTSFLSN STSSSSTSSD EDIQRRHMKK RKWKDFFERL 300 MKDVIKKQEE LQKKFMETLE KRERDRMVRE ETWRVQEMAR LNREHDLLVQ ERSMAAAKDA 360 TIIAFLQKIT EQQNTPILNS NTINTSPTQM QSKLPEKPSV APPHSQSPQT PQPQPPPAIA 420 VSLPMTIHTP VPTPTPQTMS LPVATKSFET PKTDNGGENF SPESSSRWPK EEIDALISLR 480 TCLDLKYQEN GPKGPLWEEI SAGMRKLGYN RNAKRCKEKW ENINKYFKKV KESNKKRPED 540 SKTCPYFNQL EALYKEKSKN ETVPNTAVFG LRPENSTPIA PIMAQPEQQW PLPQIQPQVQ 600 QQGSTNYNNQ HHHDNHESDS MDHNEDEDDI EEDEDDEDEG DGYEIVTNKQ PSSIAAATVT 660 TTATAV

Sequence ? help Back to Top

Protein Sequence Length: 666 aa Download sequence

MLGVSSTSTT PGRAVISAAP PLLPPPSQDA PESGGSSEGG GGDGGGGDVG VGGGGFSEEG  60
ERNSAGNRWH RQETLSLLKI RSDMDVVFKD SSLKGPLWEE VSRKMADLGY HRSAKKCKEK  120
FENVYKYHRR TKEGRASKAD GKTYRFFDQL QALENNPASH SLPPPPLAAP PITMAMAMAM  180
PMRSGNASVN PTPVPMPQNN AASSPQSLPF VVSHNNVVTA AVPAVNHPMM PALLLSQPQQ  240
QSQPAIQQPM ANLNQINQPQ GNTTTSFLSN STSSSSTSSD EDIQRRHMKK RKWKDFFERL  300
MKDVIKKQEE LQKKFMETLE KRERDRMVRE ETWRVQEMAR LNREHDLLVQ ERSMAAAKDA  360
TIIAFLQKIT EQQNTPILNS NTINTSPTQM QSKLPEKPSV APPHSQSPQT PQPQPPPAIA  420
VSLPMTIHTP VPTPTPQTMS LPVATKSFET PKTDNGGENF SPESSSRWPK EEIDALISLR  480
TCLDLKYQEN GPKGPLWEEI SAGMRKLGYN RNAKRCKEKW ENINKYFKKV KESNKKRPED  540
SKTCPYFNQL EALYKEKSKN ETVPNTAVFG LRPENSTPIA PIMAQPEQQW PLPQIQPQVQ  600
QQGSTNYNNQ HHHDNHESDS MDHNEDEDDI EEDEDDEDEG DGYEIVTNKQ PSSIAAATVT  660
TTATAV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	284	292	QRRHMKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	9e-91	Trihelix family protein