PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT32198.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family Trihelix
Protein Properties Length: 371aa    MW: 42586.7 Da    PI: 4.6987
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT32198.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix45.12.6e-14136220286
    trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 W+++e+  L++a   +  r +r++l+   W+ev++ + r  ++er+ +qC+++++ l+k+ykk+k    +    ++s+++yf++++
  PHT32198.1 136 WSERETFILLDAWGTRFVRHGRKSLRSEEWQEVAEIVsRGSKIERTDTQCRNRLDTLKKKYKKEKMKFAET-GSTTSKWVYFKKMD 220
                 *************************************566789**********************999985.666779*******8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    
MDDIEGYGRY PPSTYGMNQG YELSNRQKLP VHETSYSRHV DNQYVEEGGD DEDADEEEED  60
DDDGGDENGV QRIGKDVFED DDDDDDYGDS QRHQKKRKLK SLLSSYEFAP REPPPSTTAA  120
TAPKHSSGGR NPLSDWSERE TFILLDAWGT RFVRHGRKSL RSEEWQEVAE IVSRGSKIER  180
TDTQCRNRLD TLKKKYKKEK MKFAETGSTT SKWVYFKKMD MLLTSTPQKA GVSCGMDSGE  240
YVFMSQKVYL NHANGLDEMR VSPANSESAD CEEEDSEDLP PKRSRNVQSG GNGHSFKLIV  300
DSIYKFCEIY VKIENSKRQQ MLELEKMRMN FHRELEMQKR QIVERAQAEI ARIRQGSDEE  360
NDISAENVSG D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24490.12e-64Trihelix family protein