PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PHT31913.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 145aa MW: 16600.4 Da PI: 8.8418 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 65.7 | 7.2e-21 | 107 | 145 | 1 | 39 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEE CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkve 39 ldDgy+WrKYG+K+vk+s++pr+YY+C+ gC+vkk+ve PHT31913.1 107 LDDGYKWRKYGKKMVKNSPNPRNYYKCSNGGCNVKKRVE 145 59************************************8 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 145 aa Download sequence |
MENFSYNYSN PNPNNGDIYS SNFIDTPENF ELSGCYLFPE DGSSDEFLSQ NEFVQSASDS 60 RGSYSNIKPA PTTTHHNMQV KCTKGVMKKV DAKSRVAFRF RSELEVLDDG YKWRKYGKKM 120 VKNSPNPRNY YKCSNGGCNV KKRVE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G26170.1 | 3e-27 | WRKY family protein |