PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT31897.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 233aa    MW: 26999.2 Da    PI: 8.7859
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT31897.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY102.42.5e-32156214159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 ldDgy+WrKYGqK+vk++++prsYYrCt+ +C+vkk+ver aedp++v++tYeg+H h+
  PHT31897.1 156 LDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHVHS 214
                 59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MFSQSLLEDH QDMSSQLGFF SFPPNYNNVG MISTTTTATL PFIGYNQNTL KTLTMNIPPS  60
FDHSLNIQES THDPRHKEDL TPIFGGPHLH SLQKSTPNTW AWGEVNESSN IIKRGEFDHD  120
HNLGVSSIKM KKIKSSRRKV REPRFCFKTM SDVDVLDDGY KWRKYGQKVV KNTQHPRSYY  180
RCTQDNCRVK KRVERLAEDP RMVITTYEGR HVHSPSHDEE DSQASSQLNN LLW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39410.17e-53WRKY family protein