PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT31885.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NF-YB
Protein Properties Length: 228aa    MW: 26403.7 Da    PI: 5.3528
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT31885.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB67.42.6e-211792235094
       NF-YB  50 asdkcqrekrktingddllwalatlGfedyveplkvylkkyrele 94 
                 asd+cq+ekrktingddl+w+latlGfedy+eplkv+l +yre+ 
  PHT31885.1 179 ASDNCQKEKRKTINGDDLIWTLATLGFEDYIEPLKVHLIRYREVI 223
                 9******************************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MLSGYAKNGT FCDAIDVFEA MPVKNVVSHN AILSLYLGIG DFMSARQVFD EIGERNIACW  60
NTMINGLEFV WDDKEQFDDV ARCRSKFPFL VFRESEYGVT DILYAAARSK SYDLCRVLLD  120
FAITPMFLMS LQVVRKLMLE YDTKKGKIHF LKLAMLDGFY ILLPLLETWH LEFTHLIWAS  180
DNCQKEKRKT INGDDLIWTL ATLGFEDYIE PLKVHLIRYR EVIAVSPN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38880.65e-22NF-YB family protein