PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT31710.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | E2F/DP | ||||||||
Protein Properties | Length: 384aa MW: 43227.8 Da PI: 8.7355 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 74.7 | 9.4e-24 | 17 | 82 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 rk+ksL+ll+++fl+l++++ +++ l+++a++L v +rRRiYDi+NVLe+++++++k+kn+++wkg PHT31710.1 17 RKQKSLGLLCSNFLSLYNREGVETIGLDDAARRL---GV--ERRRIYDIVNVLESIGVLARKAKNRYSWKG 82 79*****************999************...**..****************************98 PP | |||||||
2 | E2F_TDP | 74.7 | 9.4e-24 | 151 | 231 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 r+eksL+lltq+f+kl+ +++ ++++l+e+ak L+ + +++k+RR+YDi+NVL++++ iek ++k+++rw g PHT31710.1 151 RREKSLGLLTQNFVKLFLCTNVDMICLDEAAKILLGDgrppaMTRTKVRRLYDIANVLSSMKFIEKthhpeTRKPAFRWLG 231 689**************************************99999*********************99999*******87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 384 aa Download sequence |
MALSLDPSKD SRSTYCRKQK SLGLLCSNFL SLYNREGVET IGLDDAARRL GVERRRIYDI 60 VNVLESIGVL ARKAKNRYSW KGFGAIPRTL EQLKEEGLKD NGSGFDGSSS VKGSDDDDDD 120 RDSNLIDSSQ TDKLNPNSGV NSAGPFKSDN RREKSLGLLT QNFVKLFLCT NVDMICLDEA 180 AKILLGDGRP PAMTRTKVRR LYDIANVLSS MKFIEKTHHP ETRKPAFRWL GLRERSEDKS 240 VDALCANESK KRVFGSDLTN STIKRSRVGL PMDGISDEAT RIQLLTEVKC ENPENDFHIP 300 KQEPGLTTSK KSYHFGPFAP PTIPPAEVSQ SDRMKRVHDW ESLASNYHPQ YHNQALKDLF 360 AHYVEAWKSW YLEVAGKNPI QLIS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G48160.2 | 1e-121 | E2F/DP family protein |