PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT31433.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

DBB

Protein Properties

Length: 456aa MW: 50015.7 Da PI: 4.7503

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT31433.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	19.4	2.2e-06	3	47	4	42
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 ++C++++ ++ +C+ ++ lC +C + H+ H+++p+ PHT31433.1 3 PVCELCGVARAVVYCKPDSARLCLSCDGYVHSAnplsrrHSRSPI 47 79****99*******************66788888988776 PP
2	zf-B_box	25.1	3.6e-08	44	87	2	41
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg.....Htvvp 41 + ++C++++++++ C d ++lCe C +H g H++++ PHT31433.1 44 RSPICDKCNSQPALVRCMDEAVCLCEGCDWDGH-GcigtgHRLQK 87 6799*****************************.77888899877 PP

Sequence ? help Back to Top
Protein Sequence Length: 456 aa Download sequence
MDPVCELCGV ARAVVYCKPD SARLCLSCDG YVHSANPLSR RHSRSPICDK CNSQPALVRC 60 MDEAVCLCEG CDWDGHGCIG TGHRLQKLNP YTGCPSPDEF TRMFSLVLET SIGNDTSFGS 120 FGTRPRSSCC INENNSSLEI KGNDDSLVAS KLNEFASNYK FESWVIPPDP NYMTSYNKDP 180 APFSEGSGLP KQDCPIKDLG LEEGDDLSDG VDFDDVTLNF DCGYEILGSS QQSHPRYSNE 240 DKELDCLVME KNSSVTGSNN VETSHEATSS VQQEYMGLQS SQMVAAASST NLLQTMNATA 300 NCVLMNPTCN GSIGALPFLP APIHPSMSLS LSNITGESSV TTEYQDCGLS PGFLNEAPWD 360 LSIENCPQKR HEAKMRYNEK KKTRTLEVIS ENQIISQYIY HNGKRGRPNQ KAFNEHSEQE 420 EVAMISNGLA GSGSQRRQLQ KDSAFPLHSD LRKPPT

Sequence ? help Back to Top

Protein Sequence Length: 456 aa Download sequence

MDPVCELCGV ARAVVYCKPD SARLCLSCDG YVHSANPLSR RHSRSPICDK CNSQPALVRC  60
MDEAVCLCEG CDWDGHGCIG TGHRLQKLNP YTGCPSPDEF TRMFSLVLET SIGNDTSFGS  120
FGTRPRSSCC INENNSSLEI KGNDDSLVAS KLNEFASNYK FESWVIPPDP NYMTSYNKDP  180
APFSEGSGLP KQDCPIKDLG LEEGDDLSDG VDFDDVTLNF DCGYEILGSS QQSHPRYSNE  240
DKELDCLVME KNSSVTGSNN VETSHEATSS VQQEYMGLQS SQMVAAASST NLLQTMNATA  300
NCVLMNPTCN GSIGALPFLP APIHPSMSLS LSNITGESSV TTEYQDCGLS PGFLNEAPWD  360
LSIENCPQKR HEAKMRYNEK KKTRTLEVIS ENQIISQYIY HNGKRGRPNQ KAFNEHSEQE  420
EVAMISNGLA GSGSQRRQLQ KDSAFPLHSD LRKPPT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21880.1	4e-64	CO-like family protein