PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT30710.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

CAMTA

Protein Properties

Length: 1103aa MW: 123355 Da PI: 6.0575

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT30710.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	181.7	8.4e-57	20	136	2	118
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcyw 100 ++ ++rwl++ e+++iL n++k++++ e+++rp+sgsl+L++rk++ryfrkDG+sw+kkkdgktv+E+he+LK g+++vl+cyYah+een++fqrr+yw PHT30710.1 20 VEAQHRWLRPAEVCEILRNYQKFRIAPEPPNRPPSGSLFLFDRKVLRYFRKDGHSWRKKKDGKTVKEAHERLKAGSIDVLHCYYAHGEENENFQRRSYW 118 6779********************************************************************************************* PP CG-1 101 lLeeelekivlvhylevk 118 +Leee+++ivlvhy+evk PHT30710.1 119 MLEEEMSHIVLVHYREVK 136 *************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1103 aa Download sequence
MAESRRYGLN AQLDIEQILV EAQHRWLRPA EVCEILRNYQ KFRIAPEPPN RPPSGSLFLF 60 DRKVLRYFRK DGHSWRKKKD GKTVKEAHER LKAGSIDVLH CYYAHGEENE NFQRRSYWML 120 EEEMSHIVLV HYREVKGNRT NFSRIKEPQQ VTPDFQETDE DVRSSEVDSS ASTKFYPNDY 180 QVNSQVTDTT SLSSVQASEY EDAESVYNQH PTSGFHSFLD AQPRAGDGLA VPYRPIPFSN 240 DHQVQFAGSS GMNFSSIPPG NRNGNTANSY IPSRNLDFPL WETLSINSPA AYESLHFQSS 300 GQPGANNLMH EQGNTTMGEM FLNDFKRQEQ ENRIDGLGNW QTSEGASSFI PKWSMDQKLN 360 PDLASGHRSS GVYGVEHHNS LEASQVLPAQ QDKHPTHNEL QSQLSDANAG GSSLNADLDH 420 NLIIGVKTDY SALKQPLLDG VLKREGLKKL DSFDRWISRE LEDVSESHMQ QSNSSSYWDN 480 VGDEDGVDNS TIASQVQLDT YMLSPSLAQD QFFSIIDFSP NWAFVGSEIK VLITGKFLKS 540 QQEVENCSWA CMFGELEVPA EVIADGVLRC HTPVQKAGRV PFYITCSNRL ACSEVREFDF 600 RVTEGQDVDV ANPNTCSSSE SLLHMRFGKL LSLESTASQT SPPISGDDVS HMSSKINSLL 660 KEDDNEWKEM LHLTNENNFM AEKVKDQLLQ KFLKEKLRAW LLQKVAEGGK GPNILDEGGQ 720 GVLHFAAALG YDWAILPTIA AGVSVNFRDV NGWTALHWAA SYGRERTVVF LISLDAAPGA 780 LTDPTPKHPS GRTPADLASS NGHKGIAGYL AESNLSSHLS SLELKEKKQG ENVQALGEAV 840 QTVSERTATP ASDGDWPHGV SLKDSLAAVR NATQAAARIH QVFRVQSFQR KQLKEYGGSE 900 FGLSDECALS LLTMKTSRAG HHDEPVHAAA VRIQNKFRSW KGRRDFLLIR QRIIKIQAHV 960 RGHQVRNKYK NIIWSVGILE KVILRWRRKG SGLRGFKPEA PTEASNSQVQ PAQADDYDFL 1020 KEGRKQTEER LQKALARVKS MVQYPEARDQ YRRLLNVVSD MQEPNSASNG APSNNSVEAA 1080 DFGDDLIDLD DLLDDDTVMP TAP

Sequence ? help Back to Top

Protein Sequence Length: 1103 aa Download sequence

MAESRRYGLN AQLDIEQILV EAQHRWLRPA EVCEILRNYQ KFRIAPEPPN RPPSGSLFLF  60
DRKVLRYFRK DGHSWRKKKD GKTVKEAHER LKAGSIDVLH CYYAHGEENE NFQRRSYWML  120
EEEMSHIVLV HYREVKGNRT NFSRIKEPQQ VTPDFQETDE DVRSSEVDSS ASTKFYPNDY  180
QVNSQVTDTT SLSSVQASEY EDAESVYNQH PTSGFHSFLD AQPRAGDGLA VPYRPIPFSN  240
DHQVQFAGSS GMNFSSIPPG NRNGNTANSY IPSRNLDFPL WETLSINSPA AYESLHFQSS  300
GQPGANNLMH EQGNTTMGEM FLNDFKRQEQ ENRIDGLGNW QTSEGASSFI PKWSMDQKLN  360
PDLASGHRSS GVYGVEHHNS LEASQVLPAQ QDKHPTHNEL QSQLSDANAG GSSLNADLDH  420
NLIIGVKTDY SALKQPLLDG VLKREGLKKL DSFDRWISRE LEDVSESHMQ QSNSSSYWDN  480
VGDEDGVDNS TIASQVQLDT YMLSPSLAQD QFFSIIDFSP NWAFVGSEIK VLITGKFLKS  540
QQEVENCSWA CMFGELEVPA EVIADGVLRC HTPVQKAGRV PFYITCSNRL ACSEVREFDF  600
RVTEGQDVDV ANPNTCSSSE SLLHMRFGKL LSLESTASQT SPPISGDDVS HMSSKINSLL  660
KEDDNEWKEM LHLTNENNFM AEKVKDQLLQ KFLKEKLRAW LLQKVAEGGK GPNILDEGGQ  720
GVLHFAAALG YDWAILPTIA AGVSVNFRDV NGWTALHWAA SYGRERTVVF LISLDAAPGA  780
LTDPTPKHPS GRTPADLASS NGHKGIAGYL AESNLSSHLS SLELKEKKQG ENVQALGEAV  840
QTVSERTATP ASDGDWPHGV SLKDSLAAVR NATQAAARIH QVFRVQSFQR KQLKEYGGSE  900
FGLSDECALS LLTMKTSRAG HHDEPVHAAA VRIQNKFRSW KGRRDFLLIR QRIIKIQAHV  960
RGHQVRNKYK NIIWSVGILE KVILRWRRKG SGLRGFKPEA PTEASNSQVQ PAQADDYDFL  1020
KEGRKQTEER LQKALARVKS MVQYPEARDQ YRRLLNVVSD MQEPNSASNG APSNNSVEAA  1080
DFGDDLIDLD DLLDDDTVMP TAP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	0.0	CAMTA family protein