PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT30596.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Protein Properties

Length: 1066aa MW: 121100 Da PI: 9.6607

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT30596.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	35.6	1.7e-11	14	86	17	99
E--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 17 vlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +pk f+ ++ +g ++++ + ++g++W vkl ++++ l++GW++F + L+ gD v+F+++g++ef v++f++ PHT30596.1 14 KIPKGFL-KYlKGH--SHIERAILKRTGKKWLVKL--NGRR----LEDGWEKFSGELSLQLGDLVIFRHEGDMEF--EVSIFDS 86 69**9.564655..567888899******..8888....**********************999999..9999986 PP
2	B3	39.5	1e-12	262	341	5	87
-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 ++++++l+ g l++pk+fa ++g+++++ l+++de+ sW++++ r + ++++++G ++F +n Lkeg ++F ++ + PHT30596.1 262 TIKPYSLTYGFLCVPKHFACANGLINKK-CCLIVNDETQTSWNLRI--RSCNTQVYMGEGCRKFIAENCLKEGHHIMFVVVTD 341 678999**************887544.47999********..999999**********************97654 PP

Sequence ? help Back to Top
Protein Sequence Length: 1066 aa Download sequence
MLTGDNDVNA VNQKIPKGFL KYLKGHSHIE RAILKRTGKK WLVKLNGRRL EDGWEKFSGE 60 LSLQLGDLVI FRHEGDMEFE VSIFDSSECE REDGAEENNR TPEETSNKFE FKDATGKPKP 120 KITSQCKAFS DLEAAKDMLL GLPHFISTVK PYWMSMSMIH VPKLFARESG LSRRKCGIMI 180 RDEERSWPFR LFYRGRRTFI GGEWHLRGDA SLRPEGKKIY FDTEIVSTQG KLNASIKSSI 240 KAVSHAKAAA HKSYGHSNFV CTIKPYSLTY GFLCVPKHFA CANGLINKKC CLIVNDETQT 300 SWNLRIRSCN TQVYMGEGCR KFIAENCLKE GHHIMFVVVT DGETPIWKFH VVTDGGTPVR 360 RFQGKPIAVD KAIQEKSRHS TARVKVELDL LAKLPQRMKL QYVYDKSGKI TDHFQKFVYD 420 NLPSYCPFCV RIDSLIRNTR KQIESSQTTN SSNRPIVQKD VLCLNTFDAL TDTIVHVPSQ 480 SLQPSGEQHG YSRQQLTSSR SDQNVEKGAT SAQSRADLVD EEDEKITSPP MQRKLSPTTP 540 IFVYRSTKLL TSGHKNVIAN KNESKLVASK FSPTTVDLSK YVLDEEENDI DLGEDSFDKD 600 DEDNILDICF DKVARDGDIS PRHRRSGSNK NKKKTHGRHH SWDGRALAQA VTTNIQGNHQ 660 AAVPLQQNGD LAATRIRDFM RMNPPNYLGQ KYSMSKFVTG VSGLVFKECR TTMLIRDIDL 720 SKLMTYAQQI KAEKLKGRER RNKKVRPNSL SMGKQGLKGV KSLLCYSLVA VNFRVGPEKL 780 SKPFLVSTPV GVPPDREIEF DIDLLLDTQP ISIPPYHMAP AELKDPKEQL KDLLDKSFIR 840 PNVSPWGTSI LFVHKKDGSF QMYIDTLRGR ECDVPMTAFR TRYGHFEFLV LSFRLGYLVY 900 LALLESLSEG SWYPSSSQFG FSPSDRWSVG KATLIGPDVV FKAMKKVQLI RMRLKTAQSH 960 QKFYADARRR DLEFEVNDLA YLKVAYEVKL PAELSSVHLV CHLSILKKRI GDPTVVVPLE 1020 NTDIQDSLSY EEIPVKILDY QICRLRNKKV SLVKVLWRNQ SVEGAT

Sequence ? help Back to Top

Protein Sequence Length: 1066 aa Download sequence

MLTGDNDVNA VNQKIPKGFL KYLKGHSHIE RAILKRTGKK WLVKLNGRRL EDGWEKFSGE  60
LSLQLGDLVI FRHEGDMEFE VSIFDSSECE REDGAEENNR TPEETSNKFE FKDATGKPKP  120
KITSQCKAFS DLEAAKDMLL GLPHFISTVK PYWMSMSMIH VPKLFARESG LSRRKCGIMI  180
RDEERSWPFR LFYRGRRTFI GGEWHLRGDA SLRPEGKKIY FDTEIVSTQG KLNASIKSSI  240
KAVSHAKAAA HKSYGHSNFV CTIKPYSLTY GFLCVPKHFA CANGLINKKC CLIVNDETQT  300
SWNLRIRSCN TQVYMGEGCR KFIAENCLKE GHHIMFVVVT DGETPIWKFH VVTDGGTPVR  360
RFQGKPIAVD KAIQEKSRHS TARVKVELDL LAKLPQRMKL QYVYDKSGKI TDHFQKFVYD  420
NLPSYCPFCV RIDSLIRNTR KQIESSQTTN SSNRPIVQKD VLCLNTFDAL TDTIVHVPSQ  480
SLQPSGEQHG YSRQQLTSSR SDQNVEKGAT SAQSRADLVD EEDEKITSPP MQRKLSPTTP  540
IFVYRSTKLL TSGHKNVIAN KNESKLVASK FSPTTVDLSK YVLDEEENDI DLGEDSFDKD  600
DEDNILDICF DKVARDGDIS PRHRRSGSNK NKKKTHGRHH SWDGRALAQA VTTNIQGNHQ  660
AAVPLQQNGD LAATRIRDFM RMNPPNYLGQ KYSMSKFVTG VSGLVFKECR TTMLIRDIDL  720
SKLMTYAQQI KAEKLKGRER RNKKVRPNSL SMGKQGLKGV KSLLCYSLVA VNFRVGPEKL  780
SKPFLVSTPV GVPPDREIEF DIDLLLDTQP ISIPPYHMAP AELKDPKEQL KDLLDKSFIR  840
PNVSPWGTSI LFVHKKDGSF QMYIDTLRGR ECDVPMTAFR TRYGHFEFLV LSFRLGYLVY  900
LALLESLSEG SWYPSSSQFG FSPSDRWSVG KATLIGPDVV FKAMKKVQLI RMRLKTAQSH  960
QKFYADARRR DLEFEVNDLA YLKVAYEVKL PAELSSVHLV CHLSILKKRI GDPTVVVPLE  1020
NTDIQDSLSY EEIPVKILDY QICRLRNKKV SLVKVLWRNQ SVEGAT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	632	636	KKKTH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24645.1	1e-22	B3 family protein