PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT30476.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

HSF

Protein Properties

Length: 379aa MW: 42921.8 Da PI: 7.8088

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT30476.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	115.2	4e-36	25	117	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+y++++d+++++++sw e+ ++fvv+ + efa+++Lp+yFkh+nf+SFvRQLn+YgF+k+ ++ weF+++ Fk+g+k+ll++i+ PHT30476.1 25 FLTKTYQLVDDPSTDHIVSWGEDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDR---------WEFANEFFKRGEKHLLCEIH 112 9***************************************************************99.........**************** PP XXXXX CS HSF_DNA-bind 99 rkkse 103 r+k++ PHT30476.1 113 RRKTA 117 986 PP

Sequence ? help Back to Top
Protein Sequence Length: 379 aa Download sequence
MALMLDNCEG ILLSLDSHKS VPAPFLTKTY QLVDDPSTDH IVSWGEDDTT FVVWRPPEFA 60 RDLLPNYFKH NNFSSFVRQL NTYGFRKIVP DRWEFANEFF KRGEKHLLCE IHRRKTAQPQ 120 SIPMNHHHSF NHHHQITGPG FFPNYPTYNR LSISPPDSDE QFLPQHHQQQ HNVNWCDSPS 180 SNNNANNNSN STSTVTALSE DNDRLRRSNN MLMSELAHMR KLYNDIIYFV QNHVKPVTPS 240 SSYNPCSLLP ASATPIIQKN IHHQQQFSYQ QITNPKNVLM GNSNTNNNVV SPSKTSQSSS 300 VTILDEAAGG GAATTTTNGG DNRSTKLFGV PLMSKKRVHP EYSSTYYSTT NMVETNKARL 360 MVLEKDDLGL NLMPPSSSS

Sequence ? help Back to Top

Protein Sequence Length: 379 aa Download sequence

MALMLDNCEG ILLSLDSHKS VPAPFLTKTY QLVDDPSTDH IVSWGEDDTT FVVWRPPEFA  60
RDLLPNYFKH NNFSSFVRQL NTYGFRKIVP DRWEFANEFF KRGEKHLLCE IHRRKTAQPQ  120
SIPMNHHHSF NHHHQITGPG FFPNYPTYNR LSISPPDSDE QFLPQHHQQQ HNVNWCDSPS  180
SNNNANNNSN STSTVTALSE DNDRLRRSNN MLMSELAHMR KLYNDIIYFV QNHVKPVTPS  240
SSYNPCSLLP ASATPIIQKN IHHQQQFSYQ QITNPKNVLM GNSNTNNNVV SPSKTSQSSS  300
VTILDEAAGG GAATTTTNGG DNRSTKLFGV PLMSKKRVHP EYSSTYYSTT NMVETNKARL  360
MVLEKDDLGL NLMPPSSSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46264.1	8e-98	HSF family protein