PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT30455.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 349aa    MW: 38497.5 Da    PI: 10.2401
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT30455.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.81.7e-31277334359
                 -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +dp ++++tYegeHnh+
  PHT30455.1 277 DDYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERALDDPAMLIVTYEGEHNHS 334
                 99************************988****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    
MAVELMSTGY RPNNFSSKME ENSVQEAAAA GLQSVEKLIR LLSQSQQQQQ NHQQQANFQN  60
SSSNDYQVVA DVAVNKFKKF ISLLDKNRTG HARFRRGPIT SPPPPPPPPP VPAKPQQNKQ  120
QMEESEKQQS SATKIYCPTP IQRLPPLPHN HHQQILIKNG SIERKEAASS TTINFASPSP  180
ATSFMSSLTG ETESLQNSLS SGFQITNLSQ VSSAGRPPLS TSSFKRKCSS MDDIALKCNS  240
AGGSSGRCHC PKKRKSRVKR VVRVPAISMK MADIPPDDYS WRKYGQKPIK GSPHPRGYYK  300
CSSVRGCPAR KHVERALDDP AMLIVTYEGE HNHSHSITET PATHVLESS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.16e-86WRKY family protein