PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT30407.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 246aa    MW: 27184 Da    PI: 8.2761
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT30407.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.69.1e-1359105354
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 ++h+e+ErrRR+riN  +++Lr l+P++      K++Ka+ L ++v  +k+L
  PHT30407.1  59 KSHSEAERRRRQRINAHLSTLRNLVPSS-----DKMDKAALLAQVVCQVKQL 105
                 58*************************8.....7************999988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MNFQISGSSG EFCENEAKGS KGVPQSLVLD IEKSELVKAS GRVEKKVGKS EGKTIAALKS  60
HSEAERRRRQ RINAHLSTLR NLVPSSDKMD KAALLAQVVC QVKQLKETAT HVSESFLIPL  120
DSDEIRVETI AENAAIDGTC LYKASICCEY RPDLLSDLRR VLTTLHVNLV KSEISTLGSR  180
VKNVFVFTNN VIDGGYCANI EAQEIFLSTV RQAFSSVLDK VSAFPEYSAY PNKRQRISCF  240
DSSTLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.13e-37bHLH family protein