PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT30035.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

CAMTA

Protein Properties

Length: 1040aa MW: 117288 Da PI: 5.5502

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT30035.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	178.8	6.9e-56	20	136	3	118
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcyw 100 +e ++rwl++ ei++iL n++k++lt e++ rp sgs++L++rk++ryfrkDG++w+kkkdgktv+E+hekLKvg+++vl+cyYah+ee+ +fqrr+yw PHT30035.1 20 SEvQHRWLRPAEICEILRNYRKFHLTPEAPYRPVSGSVFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSIDVLHCYYAHGEEDDNFQRRSYW 118 5559********************************************************************************************* PP CG-1 101 lLeeelekivlvhylevk 118 +Le++l +iv+vhylevk PHT30035.1 119 MLEQDLMHIVFVHYLEVK 136 *************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1040 aa Download sequence
MADCGSDPSG FRLDITQILS EVQHRWLRPA EICEILRNYR KFHLTPEAPY RPVSGSVFLF 60 DRKVLRYFRK DGHNWRKKKD GKTVKEAHEK LKVGSIDVLH CYYAHGEEDD NFQRRSYWML 120 EQDLMHIVFV HYLEVKGNKV NVGYIRSVKS AHSNYQNECS LSDSMPTGHK KLASANADSA 180 SLASTLTEAH EEAESEDNHH ACSRFHSYPD RASGMDSHLV ESRDTICSSY GSPQSSVEYT 240 SLPSIDGAGK CDLGNFASGP QRTVDLGYGV PVSQHCSNGE MVCQDDFKNN LSVHENWQFH 300 GQNVNQDLIA DLSYGLGNSF QNRSLPSDLL SVRGQSYLYP DAQEGQLTQL DLQYLNSLLE 360 VQGDVNQESN MDMIELGDYS TVKQPQLSSV KMEEGLKKVD SFSRWVAKEL EDVEELHMQP 420 NNRISWNAID TEEDGSYLPN RLHMDSDSLN PSLSQEQVFS IIDFSPNWAY SNFETKVLIT 480 GRFLKSEGDL VEYKWSCMFG EVEVPAEVLA DGVLRCHAPP HKPGVLPFYV TCSNRLACSE 540 VREFEYRFGP FQEFGAANVS NTEMHLLERI ENLLSLGPVS NCRISDNMEA AKDKQSTVNK 600 IIFMMEEENQ QMIERASDYD TSQCRVKEDL FLESKLKQNF YAWLIHQVTD DGRGRTLLDD 660 EGQGILHLVA ALGYDWALKP ILASGVSVDF RDINGWTALH WAAFYGREKT VVGLVSLGAS 720 PGALTDPSAE FPLARTPADL ASANGHKGIS GFLAESSLTT HLTKLTVSDA KEELASEGCE 780 AKVGETFTER VAVTTTGNDV PDVLSLKDSL AAIRNATQAA ARIHQIFRVQ SFQRKQIIEH 840 SDDELSSDEN ALSILASKSC KLGQNNGIAH AAAIQIQKKF RGWNKRKEFL LIRQKIVKIQ 900 AHIRGHQVRK KYKPIIWSVG ILEKVILRWR RKRSGLRGFK SEEVMNKPST QDDSLPEDDY 960 DFLKEGRKQT EVRMQKALAR VKSMTQYPEG RAQYRRLLTA AEGLREVKQD GPTQIPEIPE 1020 DTVYPEEELF DVDSLLDDVE

Sequence ? help Back to Top

Protein Sequence Length: 1040 aa Download sequence

MADCGSDPSG FRLDITQILS EVQHRWLRPA EICEILRNYR KFHLTPEAPY RPVSGSVFLF  60
DRKVLRYFRK DGHNWRKKKD GKTVKEAHEK LKVGSIDVLH CYYAHGEEDD NFQRRSYWML  120
EQDLMHIVFV HYLEVKGNKV NVGYIRSVKS AHSNYQNECS LSDSMPTGHK KLASANADSA  180
SLASTLTEAH EEAESEDNHH ACSRFHSYPD RASGMDSHLV ESRDTICSSY GSPQSSVEYT  240
SLPSIDGAGK CDLGNFASGP QRTVDLGYGV PVSQHCSNGE MVCQDDFKNN LSVHENWQFH  300
GQNVNQDLIA DLSYGLGNSF QNRSLPSDLL SVRGQSYLYP DAQEGQLTQL DLQYLNSLLE  360
VQGDVNQESN MDMIELGDYS TVKQPQLSSV KMEEGLKKVD SFSRWVAKEL EDVEELHMQP  420
NNRISWNAID TEEDGSYLPN RLHMDSDSLN PSLSQEQVFS IIDFSPNWAY SNFETKVLIT  480
GRFLKSEGDL VEYKWSCMFG EVEVPAEVLA DGVLRCHAPP HKPGVLPFYV TCSNRLACSE  540
VREFEYRFGP FQEFGAANVS NTEMHLLERI ENLLSLGPVS NCRISDNMEA AKDKQSTVNK  600
IIFMMEEENQ QMIERASDYD TSQCRVKEDL FLESKLKQNF YAWLIHQVTD DGRGRTLLDD  660
EGQGILHLVA ALGYDWALKP ILASGVSVDF RDINGWTALH WAAFYGREKT VVGLVSLGAS  720
PGALTDPSAE FPLARTPADL ASANGHKGIS GFLAESSLTT HLTKLTVSDA KEELASEGCE  780
AKVGETFTER VAVTTTGNDV PDVLSLKDSL AAIRNATQAA ARIHQIFRVQ SFQRKQIIEH  840
SDDELSSDEN ALSILASKSC KLGQNNGIAH AAAIQIQKKF RGWNKRKEFL LIRQKIVKIQ  900
AHIRGHQVRK KYKPIIWSVG ILEKVILRWR RKRSGLRGFK SEEVMNKPST QDDSLPEDDY  960
DFLKEGRKQT EVRMQKALAR VKSMTQYPEG RAQYRRLLTA AEGLREVKQD GPTQIPEIPE  1020
DTVYPEEELF DVDSLLDDVE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	0.0	CAMTA family protein