PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT29383.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

MYB_related

Protein Properties

Length: 447aa MW: 49020.7 Da PI: 4.4369

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT29383.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48	2.9e-15	133	175	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 rg+++++E l+++++ lG++ W+ Ia++++ gRt++++k++w+ PHT29383.1 133 RGSFSPQEAALIIELHSILGNR-WAQIAKHLP-GRTDNEVKNFWN 175 899*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 447 aa Download sequence
MTEMFDIVVT VMMVAIGNGG GSDVKLVDIY DVVMMMVEAV TEVETPMTMV VVMVAEECMD 60 ANDVLVVVSG GALVVMDELV CTWDWLIVVD DSVVVGGVDI DVDVGIGVDG GLQRCGKSCR 120 LRWINYLRPD LKRGSFSPQE AALIIELHSI LGNRWAQIAK HLPGRTDNEV KNFWNSSIKK 180 KLQLSHGTFS DLSIIFPNNN NLIANPNPNP SFDNSYSFNN PNVPITNSFM SSTNNSSPLI 240 EQLDQMINIP NGDLNLINQV VPYSLPMSFD SMSNDPTWFN FNYPHHLQHD LEYKPSVIKQ 300 DNSNPMFTSS ISLNCTNGEN FMDSTNADIK IHQDLMMAPL LLPKLSETIK GNEGGILEST 360 PVASQYIHSM AISSLPCTIP TGYTMNPHNN NNVHGVVHEM KQIESVHMSS SPSSSKSSAS 420 GSSSLSALSC SQFMMNPCSN LPTTWDS

Sequence ? help Back to Top

Protein Sequence Length: 447 aa Download sequence

MTEMFDIVVT VMMVAIGNGG GSDVKLVDIY DVVMMMVEAV TEVETPMTMV VVMVAEECMD  60
ANDVLVVVSG GALVVMDELV CTWDWLIVVD DSVVVGGVDI DVDVGIGVDG GLQRCGKSCR  120
LRWINYLRPD LKRGSFSPQE AALIIELHSI LGNRWAQIAK HLPGRTDNEV KNFWNSSIKK  180
KLQLSHGTFS DLSIIFPNNN NLIANPNPNP SFDNSYSFNN PNVPITNSFM SSTNNSSPLI  240
EQLDQMINIP NGDLNLINQV VPYSLPMSFD SMSNDPTWFN FNYPHHLQHD LEYKPSVIKQ  300
DNSNPMFTSS ISLNCTNGEN FMDSTNADIK IHQDLMMAPL LLPKLSETIK GNEGGILEST  360
PVASQYIHSM AISSLPCTIP TGYTMNPHNN NNVHGVVHEM KQIESVHMSS SPSSSKSSAS  420
GSSSLSALSC SQFMMNPCSN LPTTWDS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13890.2	2e-44	MYB family protein