PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT29341.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 303aa    MW: 32638.6 Da    PI: 5.3593
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT29341.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.75.5e-10152196554
                 HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 h+++Er RR+ri +++  L+el+P++      K + a++L +  +Y+k L
  PHT29341.1 152 HSIAERLRRERISERIKALQELVPSC-----NKTDRAAMLDEILDYVKFL 196
                 99***********************8.....6****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MSNNQTEGYA DDFIEQILAI PSYTGLPVAD VGNTPSDTAS FNSSGGGSAG GGGVLQQPLF  60
PLGLSLDNGR DDVSDAGGAY AVKHEREGMN IGSLYAGLEH LQSHAVRHSV PPVHHVQPFQ  120
GPPTTSTTVT VPQPPSIRPR VRARRGQATD PHSIAERLRR ERISERIKAL QELVPSCNKT  180
DRAAMLDEIL DYVKFLRLQV KVLSMSRLGG ASAVAQLVAD IPLQSVEGDS GESRSNQHIW  240
DKWSNADTER EVAKLMEEDV GAAMQYLQSK SLCIMPISLA ALIYPTQQPD DQSLVKPEPA  300
APS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1157162RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.31e-73bHLH family protein