PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT29185.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 264aa MW: 29542.1 Da PI: 7.6606

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT29185.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28.6	2.5e-09	144	191	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L+ l+P + +k Ka +L + ++Y++sLq PHT29185.1 144 SHSLAERVRREKISERMKILQALVPGC----DKVTGKALMLDEIINYVRSLQ 191 8***********************9....555***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 264 aa Download sequence
MEANSNSFHL DSLYLPIKMS TFLEEPNNTS LPNCISQFYQ TESNLQEFPV SMSSSHVTNK 60 SNSSSVADKR ENKEPITNSV DTKRNSEGSS SMTSAQSKGD DGIKQRKRNG NVTKEKKIKE 120 KKAPEEAPTG YVHVRARRGQ ATDSHSLAER VRREKISERM KILQALVPGC DKVTGKALML 180 DEIINYVRSL QNQVEFLSMK LASLNPMYYD FGMELDALLV RPHDQSWSGL EAAVENTNIS 240 GYPLLDSSTS VSFQQFHLPN SISQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50915.2	1e-50	bHLH family protein