PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT29063.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GRAS
Protein Properties Length: 684aa    MW: 77435.3 Da    PI: 5.6705
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT29063.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS375.66.3e-1153056752374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                 + lL++cA+a++s d + a++lL r++e++sp+gd ++Rla+y+++AL+arl+++++ ly a+++s+ s    ++ l+a+k+f  ++P+  +s++ aN+
  PHT29063.1 305 RGLLTQCAQAMASYDSRTATELLMRIREHSSPYGDGTERLAHYLANALEARLSGTGTALYTAFASSRIS---AAQILKAYKAFITACPFKLLSNIFANK 400
                 679**********************************************************99999998...9************************** PP

        GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvk 197
                  I + ++ge ++HiiDf+i +G+QWp+L+q L+ Rp+gpp+lRiTg++ p++g   +e++eetg+rL+k++++++vpf f++ +ak++e++++eeL+++
  PHT29063.1 401 YIRKLIAGEPKIHIIDFGILYGFQWPCLIQGLSMRPGGPPELRITGIDLPQPGfkPAERVEETGRRLEKYCKRFKVPFVFKA-IAKKWESITVEELEIQ 498
                 ****************************************************999***************************.7*************** PP

        GRAS 198 pgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivn 296
                 ++E+l+Vn+ ++l +++de+v ++s+rd+vL+l+++++P+++++   +   n++ F++rf eal +ys+lfd++ea+lpre+e+r+  E+e+++r+++n
  PHT29063.1 499 RDEVLIVNSLYRLGNIPDETVVQNSPRDAVLDLIRRIRPDMFIHGVLNGTFNTPFFVTRFREALFHYSSLFDMFEASLPREDEDRKLFEEEVFARDAMN 597
                 *************************************************************************************************** PP

        GRAS 297 vvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 v+aceg+er+er et+++W+ r  +aGFk++pl+++++k+++  +r  + + ++v+e+  ++++gWk+r L+++S+W+
  PHT29063.1 598 VIACEGTERVERPETYKQWQLRCVRAGFKQLPLDQEIVKTVSNKVRSEYHKDFSVDEDGRWMLQGWKGRVLYALSCWK 675
                 ***********************************************99888*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 684 aa     Download sequence    
MEALFQEQLF HSPDAFIFRH SSIPMDPRND FVQNGTSTIF NNLASFDEDY PHALSNQVVG  60
EGNSSPPPQE EGEGDYSDAM YKFLSQMLME EDDLENKPCM FHDCMALQAT EKYLSDVLHG  120
SENYNSPQSV IINPQDYSSS LLSNPSPDSI ESPQWNLDFE SPVSVEGLSG VANHDSLFTS  180
FGNNQFNLLY KGSEEEEPAN IFQSGSSSNS PTDSTKKKNR HRGDAAADQQ RSNKQLATFA  240
HDESEPLEMY DNVLLCLNNP YVEQHSATSV TSCSPNETKK TTKVGRPKGG RKHGSNIKKE  300
VVDLRGLLTQ CAQAMASYDS RTATELLMRI REHSSPYGDG TERLAHYLAN ALEARLSGTG  360
TALYTAFASS RISAAQILKA YKAFITACPF KLLSNIFANK YIRKLIAGEP KIHIIDFGIL  420
YGFQWPCLIQ GLSMRPGGPP ELRITGIDLP QPGFKPAERV EETGRRLEKY CKRFKVPFVF  480
KAIAKKWESI TVEELEIQRD EVLIVNSLYR LGNIPDETVV QNSPRDAVLD LIRRIRPDMF  540
IHGVLNGTFN TPFFVTRFRE ALFHYSSLFD MFEASLPRED EDRKLFEEEV FARDAMNVIA  600
CEGTERVERP ETYKQWQLRC VRAGFKQLPL DQEIVKTVSN KVRSEYHKDF SVDEDGRWML  660
QGWKGRVLYA LSCWKPTRLS AKLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29060.10.0GRAS family protein