PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT29019.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 353aa    MW: 39012.4 Da    PI: 4.4827
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT29019.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.96.1e-19109157153
         AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkl 53 
                 s+y+GVr++k +g+W+AeIrd +    k++r++lg++ taeeA +a++  r+++
  PHT29019.1 109 SKYRGVRQRK-WGKWAAEIRDpF----KCRRVWLGTYSTAEEASQAYEMKRLEF 157
                 89*******9.**********65....37*******************999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    
MFEPQRQLQQ KGKNKREDLT RPVRKIRIVC NDPDATDSSD DERVDVSKKP KRFVREIILP  60
IVDAFTAKKA VSEIESSCQD SNNGDKKIKN SKGLAKTPKT PGQQRPSLSK YRGVRQRKWG  120
KWAAEIRDPF KCRRVWLGTY STAEEASQAY EMKRLEFDAM ARSMSNNSNT DVCEKSSNNG  180
SNDKDRRKGG SVGCVSEEDS AESLVSHTSH TSPASVLEMD SMTSGSATVS EVINNGKLVE  240
QKVDDAKLGL MEDSLSLAEI GAGMDFDMEM DLFFAGSDDF GQNLDDFVVE DFEDLPLCGL  300
DGDVQLPTGL PDFDFDFDFD GYNESCAWMD DAAAAPLMNG TTTTTPLNIA LCP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14889KKPKRFVREIILPIVDAFTAKKAVSEIESSCQDSNNGDKKIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.11e-34ERF family protein