PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT29015.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | ERF | ||||||||
Protein Properties | Length: 114aa MW: 13291.2 Da PI: 8.8366 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 26.1 | 2.2e-08 | 19 | 64 | 5 | 54 |
AP2 5 GVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54 GVr ++ +g++ AeI++p + +k ++lg+f t e+ k ++ ++++e PHT29015.1 19 GVRKRR-NGKFCAEIKHPLN---KKMIWLGTFVTVEDVLKNYESKKRRFE 64 9**887.8*********743...5*************9999999888876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 114 aa Download sequence |
MKFYKRISKN TCVRLYPIGV RKRRNGKFCA EIKHPLNKKM IWLGTFVTVE DVLKNYESKK 60 RRFEELVMAK SAKNVQISEK SDQESCVTDE FEEKSSMSVD EITNTSNGVE ESDE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68550.1 | 6e-14 | ERF family protein |