PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT28930.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 310aa    MW: 32643.8 Da    PI: 5.9718
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT28930.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.41.5e-09157201554
                 HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                 h+++Er RR+ri +++  L+el+P+ +      K + a +L + v+Y+k L
  PHT28930.1 157 HSIAERLRRERIAERIRALQELVPSvN------KTDRAVMLDEIVDYVKFL 201
                 99***********************55......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MANNPSEGPS DDFFEQILGF PAYNGAEPNL AGNDPGAIPP AMMLQLNSGD GSGQFSGVGL  60
GVGVGLGGLG GGGFHHGGGG GSFPLGLSLE QGKGGGGFLK MDDVSAPGRR FRDDVVDSRP  120
SSSVKPGFHG QPMPSMPHPP AIRPRVRARR GQATDPHSIA ERLRRERIAE RIRALQELVP  180
SVNKTDRAVM LDEIVDYVKF LRLQVKVLSM SRLGGAGAVA PLVTDIPISS SVEEESSEGG  240
TNNQPAWEKW SSDGTERQVA KLMEENVGAA MQFLQSKALC IMPISLASAI YHSQPPDTSS  300
LVKPETNPPS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1162167RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.32e-80bHLH family protein