PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT28574.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MYB | ||||||||
Protein Properties | Length: 427aa MW: 49399.1 Da PI: 6.0022 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.4 | 1.2e-16 | 173 | 219 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT eEd ll+++v+++G + W+ Ia+++ gR +kqc++rw+++l PHT28574.1 173 KGQWTIEEDRLLIHLVEKFGIRKWSQIAQMLK-GRIGKQCRERWHNHL 219 799****************************9.*************97 PP | |||||||
2 | Myb_DNA-binding | 54.3 | 3.1e-17 | 227 | 267 | 3 | 45 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT+eEd +l++a+ + G++ W+ Ia++++ gRt++++k++w+ PHT28574.1 227 IWTEEEDRILIEAHGEVGNK-WAEIAKKLP-GRTENSIKNHWN 267 6*******************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 427 aa Download sequence |
MELDQSNNQN LSIHQPFFMP NNNILKPEID DDFCIDSKDY YLKDFEHLDL NFSNTTFNNF 60 SQNFMIDDDT NGTTYHDPFD PFSNIEDNFS LLGDFNFCSH ELTPFDQENG ESGGSKVMKN 120 NFHDDEFMKP NLNFVNVPDD QSSCVTGDNN SSSSIKKKLG GRGRPKKSSK SSKGQWTIEE 180 DRLLIHLVEK FGIRKWSQIA QMLKGRIGKQ CRERWHNHLR PDIKKDIWTE EEDRILIEAH 240 GEVGNKWAEI AKKLPGRTEN SIKNHWNATK RRQFSRRKCR TKWPRPSSLL QNYIKSLNLE 300 KGSTKKDTNP NDRVEYTGSV AENRNENLPN RPKRHANIAK VKVSPKLEAI KFCQDNNAGD 360 FDFSEAPEFA LGDNFFDENK SMDAFMEEIN PNVGTSIMPC NYEMPTLMMQ GEVNKEIDLI 420 EMISRVN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18770.1 | 4e-72 | MYB family protein |