PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT28553.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 292aa    MW: 33544.3 Da    PI: 5.7241
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT28553.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B335.12.3e-112721994
                -HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
          B3 19 pkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94
                p  f++e++  k   kt  l++ +g  Wevk+  r +s+ ++ ++ W +Fv  + L+ gD+++F+l+++s+f  +v
  PHT28553.1  2 PGAFVKENK--KMLAKTALLKTNEGMLWEVKI-ARETSDYFICKGDWPRFVVHHMLELGDMLIFYLVDKSTF--HV 72
                778999996..558889***************.4666666778888********************987888..54 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MPGAFVKENK KMLAKTALLK TNEGMLWEVK IARETSDYFI CKGDWPRFVV HHMLELGDML  60
IFYLVDKSTF HVVPYSKKPC TNIRHLEDLS SSEEEEKNTE FGTSRGCKKV KTEPKALSDT  120
NFSKELHQSR IDRMSKAIKE IALKKQQIQK PFEKGDEVEV ASQEDGLIGS YYTATIISPI  180
GSYLYRVKYK TLFSDDESVP LEDVVTASKV RAVPPDQRKI LSENNFRLYD VVDVFANDGW  240
WFGFISGIVG EELYVYFPTT ADNIAYPPDV LRLHQEWSDG KWIFPPEQGI FN