PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PHT28533.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 237aa MW: 26931.3 Da PI: 5.0693 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 34.8 | 4.1e-11 | 19 | 64 | 5 | 54 |
AP2 5 GVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54 GVr +k +g++ AeI++p + +k ++lg+f tae+A k ++ ++++e PHT28533.1 19 GVRKRK-NGKFCAEIKHPLN---KKIIWLGTFVTAEDASKNYESKKLEFE 64 9**999.8*********743...5******************99988876 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 237 aa Download sequence |
MKSYKRISKN TYVRLYPIGV RKRKNGKFCA EIKHPLNKKI IWLGTFVTAE DASKNYESKK 60 LEFEELVMAE RAKNGQISEK SNQESCVTDK FEEKSSISVD ENTNTSNGVE ESDEESMMGT 120 WVKISKNQEV KYSHKLGVPV VDNYGFLLGE FSILDDLRIY MDCGVFVAAY AEILSEGQQV 180 HSCVFDAGSQ RLHYALLLWH HGVENTNEGY TSDNGDPPWP RNSVLQEIDE SAIVILE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G68550.1 | 2e-15 | ERF family protein |