PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT28083.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | B3 | ||||||||
Protein Properties | Length: 238aa MW: 26392.4 Da PI: 8.2176 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 59.4 | 6.3e-19 | 37 | 114 | 16 | 99 |
EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 l +pkkfa++ ++ + ++l+ +sg +W+v+l + +++ +l++GWkeFv+a+ L+e D ++Fk++g+s+f v+vf++ PHT28083.1 37 LAIPKKFANNLR--EKLGDSVSLTGPSGATWNVRL--TLIGDSLFLKDGWKEFVDAHSLEEDDLLIFKYNGSSRF--DVSVFDR 114 78******5444..457779***************..888888**************************998999..9999997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence |
MGISGNYREV MMMCREDSVS GKGMEEEPHF WILLGPLAIP KKFANNLREK LGDSVSLTGP 60 SGATWNVRLT LIGDSLFLKD GWKEFVDAHS LEEDDLLIFK YNGSSRFDVS VFDRQSSCEK 120 EASCFVKKCE HADVASRRRT KRHTPREYSS RDVSEAPPTK KSKLAATPTS EDTSKSSSHD 180 EYEPPAKKKT LASTSTSADT NESSSHNEGE PLTEKKTTLA STSTSRTRCA RANAKLRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G33280.1 | 1e-25 | B3 family protein |